| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1578 |
|---|
| Symbol | |
|---|
| ID | 4677980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 1540994 |
|---|
| End bp | 1541908 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639844093 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_991172 |
|---|
| Protein GI | 121597725 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCC GAAAGCCCGG CCGCCTGCCG CCGCTGAATG CGCTCCGCGC GTTCGAGGTG
TCCGCGCGGC ACCTGAACTT CCGCGCGGCG GCCGACGAGA TCGGCGTCAC CCAGGGCGCG
GTCGCGCAAC AGGTCCGCCA TCTGGAGGAC GCGCTCGGCG TGGCGCTGTT CGAACGCCTG
CCGCGCGGCC TCGCGCTGAC GGCCGACGGG CTCGCCTATT TCGCCGACGT GCGTCGTGCG
CTGAACCTGA TCGGCGACGC GACGGACCGG CTCGCGAAGC GCCGCGCAAA CGTCACGATC
AGCACGACGC CCTCGTTCGC GTCGCGCTGG CTGATTCCGC GGCTCGCGAG CTTCGGCGAC
GAGCATCGGG GCGTCGACCT CCGCGTGATC GCCGATTCGC AGTTCGCGAC CTTCCAGGGC
GACGGCGTCG ATCTCGCGAT TCGCTACGGC AAGCCGCCGT TCGGCAAGGG GCTCGTCACG
CGCTTGCTGT TTCCGGTCGA CATCTACGCG GTGTGCAGCC CCGCGCTGCT CGCCCCCCCC
GGCGCGCTCG CCCGCGCGCG CGATCTCGCC GGGCACGCGC TGCTGCACGA CGCGCATGAC
CTGTGGCCCG AGTTTCTCGC CGCGCTGCCC GAGCGCGTCG CGATCGATCC GGCCAAGGGG
CCGCGCTTCA ATCAATCGTC GCTCGCCATC GACGCGGCGA TCGCCGGGCA CGGCGTCGCG
CTCGCGAGCG ATCAGCTCGT CGCGCGCGAC ATCGAGGCCG GCCGGCTGCG GCGGCTGTTC
GATTTCGCGC TGCCGCTGTC GGTCGGCTAT TACATCGTCC GTCCGAGCGA GCCGCGGCGC
CCCGGCGACA TCGCGCAGAC CGAGGCGTGG CTGATCCGCC AGGCGCAGCT GGATGCGCGA
CGCGACGGCG CGTAG
|
|---|
| Protein sequence | MPARKPGRLP PLNALRAFEV SARHLNFRAA ADEIGVTQGA VAQQVRHLED ALGVALFERL
PRGLALTADG LAYFADVRRA LNLIGDATDR LAKRRANVTI STTPSFASRW LIPRLASFGD
EHRGVDLRVI ADSQFATFQG DGVDLAIRYG KPPFGKGLVT RLLFPVDIYA VCSPALLAPP
GALARARDLA GHALLHDAHD LWPEFLAALP ERVAIDPAKG PRFNQSSLAI DAAIAGHGVA
LASDQLVARD IEAGRLRRLF DFALPLSVGY YIVRPSEPRR PGDIAQTEAW LIRQAQLDAR
RDGA
|
|---|
| |