Gene BMASAVP1_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_1563 
SymbollldD 
ID4678354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008784 
Strand
Start bp1528055 
End bp1529197 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content69% 
IMG OID639844078 
ProductL-lactate dehydrogenase 
Protein accessionYP_991157 
Protein GI121597553 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTCC CGATCACCTG CATCGAAGAT CTTCGCGTTC TCGCGAAAAA ACGCATCCCG 
CGAATGTTCT ATGACTATGT CGATACGGGC TCCTACACGG AATCGACGTA TCGCGCGAAT
GAGGCCGATT TCCGGAAGAT CAGGCTGCGC CAGCGCGTGG GCGTCGACAT CTCGAACCGC
AACCTGCGCA CGACGATGGC GGGGCAGGAT GTGGCGATGC CGGTGGCGCT CGCGCCGACG
GGCCTCGTCG GCATGATGCG CGCGGACGGC GAGATCCTCG CCGCGCGCGC CGCGCGGCAT
TTCGGCGTGC CGTTCACGCT GTCGACGATG AGCATCTGCT CGATCGAGGA CATCGTCGCG
CACGTGGGCG GCCCGTTCTG GTTCCAGTTG TACATGATGC GCGATCGCGC GTTCATCGAG
CGGCTGATCG AGCGCGCGAG CGCGGCGGGC TGCCCCGCGC TCGTGCTGAC GATGGACCTG
CAGATCGCCG GCCAGCGCCA CAAGGACGTG AAGAACGGCC TGTCGGCACC GCCGCGCATC
ACGCTGCCGA ACCTGCTCGA CATGATGCGC AAGCCGGGCT GGTGCCTCGG CATGGCGCGC
ACGCGTCGCC GCCATTTCGG CAACATCGTC GGGCACGTGA AGGGCGTGAC CGACATGTGG
TCGCTCGATT CGTGGACCCG CGAGCAGTTC GATCCGACGA TCGGCTGGCG CGATGCCGAA
TGGGTCCGGC GGCGGTGGAA CGGCAAGCTG ATCGTCAAGG GCGTGCTCGA TGCGGACGAT
GCGCTCCGCG CGGCCGATGC GGGCGCGGAC GCGATCGTCG TGTCGAACCA CGGCGGCCGC
CAGCTCGACG GCGCGATGTC GTCGATCGAG GCGCTGCCCG CCATCGTCGA GGCGGCCGGC
AAGCGCGTCG AAGTGTGGCT CGACGGCGGC GTGCGCACGG GGCAGGACGT GCTGAAGGCG
GTGGCGCTCG GCGCGCGCGG CACGATGATC GGCCGCGCGT TCCTCTACGG CGTCGCCGCG
CTCGGCGAGC AAGGCGCGCG GCGCGCCCTC GAGCTCATCG CGCGCGAGCT CGATACGACG
ATGGCACTGT GCGGCTGCAC CGACATTCGA TCGGTGAACG CCGATGTGCT CGCGCGGCGC
TGA
 
Protein sequence
MSVPITCIED LRVLAKKRIP RMFYDYVDTG SYTESTYRAN EADFRKIRLR QRVGVDISNR 
NLRTTMAGQD VAMPVALAPT GLVGMMRADG EILAARAARH FGVPFTLSTM SICSIEDIVA
HVGGPFWFQL YMMRDRAFIE RLIERASAAG CPALVLTMDL QIAGQRHKDV KNGLSAPPRI
TLPNLLDMMR KPGWCLGMAR TRRRHFGNIV GHVKGVTDMW SLDSWTREQF DPTIGWRDAE
WVRRRWNGKL IVKGVLDADD ALRAADAGAD AIVVSNHGGR QLDGAMSSIE ALPAIVEAAG
KRVEVWLDGG VRTGQDVLKA VALGARGTMI GRAFLYGVAA LGEQGARRAL ELIARELDTT
MALCGCTDIR SVNADVLARR