| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1548 |
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| Symbol | |
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| ID | 4678347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 1515709 |
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| End bp | 1517247 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639844062 |
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| Product | sigma-54 dependent DNA-binding transcriptional regulator |
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| Protein accession | YP_991141 |
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| Protein GI | 121597047 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000048487 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACAAGA AAGAAAAAGT GGAGACGAAT GCATCGATTT CGGGCGGCTG GGTTCGGCTG
CCCGCCGATT ACGGCGACGT GCTGCGGCGC GCGGCGGAGT CGCTGTTCAA GACCTTCGAG
CACTCGAGCG TCGGCACGCT GATCGTCGAC AAGGATGCGC GCGTCGTCTG GATCAATCAG
CGTTACGCGG CGCGTTTCGG GTTCGCCGAT CCGCAGCAGG CGATCGGCCG CGATTGCGAA
GCGGTGATTC CGCACAGCCT GATGCGCGAG GTGGTCGCGA CCGGCCGCCC GATCCTGCTC
GACATCATGG AGACGGGCCG CGAGCCGCTC GTCGTCACGC GCCTGCCGCT GACGGACGAC
GCGGGCGAGA CCGTCGGCGC GATCGGCTTC GCGCTGTTCG ACGAGCTGAA GACGCTCACG
CCGCTCTTTT CGCGCTACAT GCAGGTCCAG CAGGAGCTGA TCGCGACGCA ACGCTCGCTC
GCGCAGGCGC GGCGGGCGAA ATACACGTTC GCGAGCTTCG TCGGCACGAG CGCGGTGAGC
CTCGAGACGA AGCGGCAGGG GCGGCGCGCC GCGCAGGTCG ATTCGCCGGT GCTGCTGCTC
GGCGAGACGG GCACCGGTAA GGAGCTGCTC GCGCATGCGA TCCACGCGGC GTCCGCGCGG
GCATTGAAGC CGCTCGTGAC CGTCAACGTC GCCGCGATTC CCGATGCGCT GCTCGAAACC
GAGTTCTTCG GCGCGGCGCC GGGCGCGTAC ACGGGCGCGG ATCGCAAGGG GCGCGTCGGC
AAGTTCGAGC TTGCCGACGG CGGCACGCTC TTTCTCGACG AAATCGGCGA CATGCCGGTG
CCGCTGCAGG GCAAGCTGCT GCGCGTGCTG CAGGACAAGG AGTTCGAGCC GGTCGGCTCG
AACCGGATCG TGCGCGCGAA TGTGCGGATC ATCGCGGCGA CGTCGGCCGA ATTGCCGGCG
CTCGTCGCGG AAGGGCGCTT TCGCGCGGAC CTTTATTACC GGCTGAACGT GCTGACGATC
CATGCGCCGC CGCTGCGCGA GCGCGCATCG GACATCGAGG CGCTCGTCTA CACGATGCTC
GAGGAACTCG CCGCGCAGCA TGGGCTGGCC GAGCACTGCG AACTGACCGA CGACGCGCTG
CGCCTGCTGT GCGCGTATCC GTGGCCCGGT AACGTGCGCG AACTGCGCAA CACGCTCGAG
CGCGCGCTGA TGCTGTCCGA TCGCGCGTTG ATCGATGCGC GCGCGCTCGC GCCGTTCATC
GGGCCGGCGC GCGGCGCGGG GGGCGGTGTC GGGGCGGGCG GTGGGGCGGG GGCGGGCGGC
GTCGGTCCGG CCGCGGTCGC CATCGCGGCG CAGACTGCCA TGGCCGATAC GCGCGCGGCG
GCGTCATCCT ATGCGGACGC ATTCGCCGCG TGGGAGCGTC AATTCCTGAT CGACGCGCTT
GCCGCGTCCA ACGGCAAGGT GACGGAAGCG GCCGCGCGCA TCGGCATCGG GCGTGCGACG
TTCTACAAGA AGCTCGCGAC GCTCGGCATT GATACGTAG
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| Protein sequence | MDKKEKVETN ASISGGWVRL PADYGDVLRR AAESLFKTFE HSSVGTLIVD KDARVVWINQ
RYAARFGFAD PQQAIGRDCE AVIPHSLMRE VVATGRPILL DIMETGREPL VVTRLPLTDD
AGETVGAIGF ALFDELKTLT PLFSRYMQVQ QELIATQRSL AQARRAKYTF ASFVGTSAVS
LETKRQGRRA AQVDSPVLLL GETGTGKELL AHAIHAASAR ALKPLVTVNV AAIPDALLET
EFFGAAPGAY TGADRKGRVG KFELADGGTL FLDEIGDMPV PLQGKLLRVL QDKEFEPVGS
NRIVRANVRI IAATSAELPA LVAEGRFRAD LYYRLNVLTI HAPPLRERAS DIEALVYTML
EELAAQHGLA EHCELTDDAL RLLCAYPWPG NVRELRNTLE RALMLSDRAL IDARALAPFI
GPARGAGGGV GAGGGAGAGG VGPAAVAIAA QTAMADTRAA ASSYADAFAA WERQFLIDAL
AASNGKVTEA AARIGIGRAT FYKKLATLGI DT
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