Gene BMASAVP1_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_1533 
Symbol 
ID4677070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008784 
Strand
Start bp1503989 
End bp1504528 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID639844048 
ProductDNA-binding protein 
Protein accessionYP_991127 
Protein GI121597232 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCTCG GGAGCAAGAT TCGGGCGTTG CGGCAGCGGC TGAAGCGCAC GCTCGACGAA 
ACAGCGACTG CCGCGGGTAT TTCCAAGCCG TTTTTGTCGC AGGTCGAACG CGGGCTCGCA
TCGCCGTCCA TCACGTCGCT GGCCGGTATC GCGCACGCGC TGGGCGTGAC GGTGCAGTAC
TTCGTCGAGA CGCCGAGCGA AGAGCGTTCG GTCTGCCGCG GCGACCAGTT GCGCTTTTTC
AGCTTCGCCG ATTCGGCGAA CCTGTTCGCG CGGCTGACGA ACGTGCCGGA GGGGCGTCAG
CTCGAGGCGA TCCTCGTGCG GATGCCGCCG GGGCAGAAGC GCTCTGAAGT GACGACGCAT
GCAGGCGAGG AATTCCTGTA TGTGATCGAG GGTGAAGTGT CGTTGACGCT GGAAGGCAAG
TCGTTCGTGC TGCATGCCGG CGACAGCGCG CATTACCAGT CGACGGTCCC GCACAGCTGG
GTCAACACCG CGAAGATCGA GTCGGTGGTG GTCTGGGTGG GAACGCCGAG GTTGTTCTAG
 
Protein sequence
MALGSKIRAL RQRLKRTLDE TATAAGISKP FLSQVERGLA SPSITSLAGI AHALGVTVQY 
FVETPSEERS VCRGDQLRFF SFADSANLFA RLTNVPEGRQ LEAILVRMPP GQKRSEVTTH
AGEEFLYVIE GEVSLTLEGK SFVLHAGDSA HYQSTVPHSW VNTAKIESVV VWVGTPRLF