| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1527 |
|---|
| Symbol | |
|---|
| ID | 4678218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | + |
|---|
| Start bp | 1498197 |
|---|
| End bp | 1499138 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639844042 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_991121 |
|---|
| Protein GI | 121598104 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTAC GCTCGATCGA CCTGAACCTG CTCGTCATAT TGGATGCGCT GCTCGCGGAG
CGGCAGGTGA CCCGCGCCGG ACAAAGGATC GGCCTGACGC AGCCGGCCGT CAGCAACGCG
CTCGGGCGGC TGCGCTACGT GTTCAAGGAC GAAATCCTGA TGCGCACGCC GCTCGGGATG
GAACTGACGC CCCGGGCGAA GGCGCTCGCC TGCCCGATTC GCCAGATTTT GCAACAAATA
GAGGAATTAT TTGTTCCGGA AAATCAGTTC GATTCATTTA CGTCCGATCG CCGTTTTACA
CTCAGAATGT CGGACCTGAC CGAATTGCTG CTGCCGCCGC CGCTATTGCG CAATATTCGG
GGTACGGCGC CGCATATCCG GATGAACGTG ATGCACCTGA ACGCGGACAA GACCGTCGAG
GCGCTCGATT CCGGCCGGCT CGACATGGCG GTCTGTGCGG GGCTCGATCA TCCGGACGCG
ATTTCGTCGC AAGTGCTGTT TCAGGATCGG CTCGTCTGCG TGCTGAGCCG GCGCCATCCG
GATGCGAACA GGCCGCTCAC GCTCGAGCGC TTCGCGGCGC TCGATTTCCT CAACGTATCG
ATCAATCCCG TCGACAGCAG CCTGATCGAC ACGATGCTCG CGGACATGCG CTTCACGCGC
CGCATCGCGT TCAACGTGCC GCACTGGCTT GTCGTGCCGA GCATGCTCGA TGCGCTGCCG
CTTGCCGTCA TCATGTCCGA GCGGCACGCG CTGAGCCTAG GCGACTCGCG CCTCGCGATC
CGCGAGCTGC CGCTCGATCT CGAGCCGGTC ACCTGGACGC TGTACTGGCA TCGGCGTTAC
GACAACAGCG TTGCGCACGA ATGGCTGCGC AATTGCATCA CCGACGTCGT CGACGCGATC
CAGCAGCGCG GCGTGTTCGA AGAGGCAAGC GCGGTGGGGT GA
|
|---|
| Protein sequence | MNLRSIDLNL LVILDALLAE RQVTRAGQRI GLTQPAVSNA LGRLRYVFKD EILMRTPLGM
ELTPRAKALA CPIRQILQQI EELFVPENQF DSFTSDRRFT LRMSDLTELL LPPPLLRNIR
GTAPHIRMNV MHLNADKTVE ALDSGRLDMA VCAGLDHPDA ISSQVLFQDR LVCVLSRRHP
DANRPLTLER FAALDFLNVS INPVDSSLID TMLADMRFTR RIAFNVPHWL VVPSMLDALP
LAVIMSERHA LSLGDSRLAI RELPLDLEPV TWTLYWHRRY DNSVAHEWLR NCITDVVDAI
QQRGVFEEAS AVG
|
|---|
| |