| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1444 |
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| Symbol | |
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| ID | 4677199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 1422355 |
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| End bp | 1423623 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639843960 |
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| Product | sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_991040 |
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| Protein GI | 121596861 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGACG CCGCCGTTCA CCGTGCGATC GATGCCGTCT GGCGGATCGA GGCCGCGAGA
ATCATCGCGC ACGTCGCGCG GCTCGTGCGC GACGTCGGCG TGGCCGAAGA GCTCGCGCAG
GACGCGCTCG TCGCGGCGCT TGAGCACTGG CCGAGCGGTG GCGTGCCGGA CAATCCGGGC
GCATGGCTGA TGACGGCCGC GAAGCGCCGC GCGCTCGATC ATCTGCGGCA GCACGCGCTG
CACGCGCGCA AGCGCGAGCA GATCGGCCTC GATCTCGATG CGCTCGGCGC GCACGTCGCG
CCTGACGTCG CCGACGTGTT CGAAGCGGCG CGCGACGACG ACATCGGCGA CGATCTGCTG
CGGCTCGTGT TCACCGCTTG TCATCCGGTG CTGTCGACCG ACGCGCGCGT CGCGCTGACG
CTGCGGCTGC TCGGGGGGCT GACGACGGGC GAGATCGCGC GCGCGTTTCT CACGCCGGAG
CCGACGATCG CGCAGCGGAT CGTGCGCGCG AAGCGCACGC TATCGGCGGC GAAGGTGCCG
TTCGAGGTGC CGCGCGCACC GGAGCGCGCG GCGCGGCTGG CATCGGTGCT CGAAGTGATC
TATCTGGTTT TCAACGAAGG CTATTCGGCG ACGGCGGGCG ACGACTGGAT GCGCCCCGCG
CTGACCGACG AGGCGCTTCG GCTCGGGCGC GTGCTCGCCG GGCTCGCGCC CGACGAGAGC
GAGGTGCACG GGCTTGTCGC GCTGATGGAG ATCCAGGCGT CGCGGATGCA TGCGCGGGTC
GATGCGCAGG GCTGCCCCGT GCTGCTGCTC GATCAGGATC GCAGCCGCTG GGATCCGCTG
CTGATCCGGC GCGGGCTCGC CGCGCTCGCA CGCTCGGAGG CGCTCGGCGG CGCGAGCGGG
CCCTATGCGC TGCAGGCGGC GCTCGCCGCA TGTCACGCGC GTGCGCGCCA TGCCGACGAT
ACCGACTGGG AGCAGATCGT CGCGCTCTAC GACGCGCTCG CGCAGGTCGC GCCCTCGCCC
GTCGTCGAGC TGAATCGCGC GGTTGCGGTC GGCATGGCGT TCGGGCCAGC GGCGGGGCTC
GAGATCGTCG ACGCGCTCGC GGCCGACCCG GCGCTCGCGC GCTATCACTG GCTGCCGAGC
GTGCGCGGCG ATCTGCTCGC GAAGCTCGGG CGGCGCGCCG AGGCGCAGGC CGAATTCCAG
CGCGCGGCCG ACATGACGCT CAATGCGCGC GAGCGTGAGA TGCTGCTTGC GCGCGCGACG
CAGCGGTGA
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| Protein sequence | MMDAAVHRAI DAVWRIEAAR IIAHVARLVR DVGVAEELAQ DALVAALEHW PSGGVPDNPG
AWLMTAAKRR ALDHLRQHAL HARKREQIGL DLDALGAHVA PDVADVFEAA RDDDIGDDLL
RLVFTACHPV LSTDARVALT LRLLGGLTTG EIARAFLTPE PTIAQRIVRA KRTLSAAKVP
FEVPRAPERA ARLASVLEVI YLVFNEGYSA TAGDDWMRPA LTDEALRLGR VLAGLAPDES
EVHGLVALME IQASRMHARV DAQGCPVLLL DQDRSRWDPL LIRRGLAALA RSEALGGASG
PYALQAALAA CHARARHADD TDWEQIVALY DALAQVAPSP VVELNRAVAV GMAFGPAAGL
EIVDALAADP ALARYHWLPS VRGDLLAKLG RRAEAQAEFQ RAADMTLNAR EREMLLARAT
QR
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