Gene BMASAVP1_1434 details

Gene Information

• Locus tag: BMASAVP1_1434
• ID: 4676982
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 1412692
• End bp: 1414737
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639843950
• Product: TonB-dependent receptor
• Protein accession: YP_991030
• Protein GI: 121597491
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCGCTGC TGCTCGCCGC GAGCCTCGCG CATGGCGAGA CGGGCGCGCC GCCCGCCGAG 
CGCCGATCGG ACGCGCCGCC CGCGACGGCG CTCGCGCCGA TCTTCGTGAC CGCGAACCCG 
CTCGGCGCGT CGGCGCTGAG CTCGCCCACC GCGTCGCTGT CCGGCGACGC GCTGACGCTG 
CGCCGCACCG ATTCGCTCGG CGACACGCTG AACGGCCTGC CCGGCGTGTC CACGACGACC 
TATGGCCCGC TCGTCGGCCG TCCGATCATC CGCGGGATGG ACGGCGATCG CATCCGCCTC 
CTGCAGAACG GCGTCGCCGC GTACGACGCG TCGTCGCTGT CCTACGATCA CGCGGTGCCG 
CAGGATCCGC TGAGCGTCGA GCGCATCGAG ATCGTGCGCG GGCCGGCGGC GTTGCTGTAC 
GGCGGCAACG CGGTCGGCGG CGTCGTCAAC ACGATCGACA ACCGGATTCC GCGCGAAGCG 
ATCACGGGCG TCTCGGGCGC GCTCGACGCG AGCTACGGCG GCGCGAACAA CGCGCGTGCG 
GGCGCGGCGC TCGTCGAAGG CGGCAACGGC CGCTTCGCGT TTCATCTCGA CGCGTTCGGC 
CGCGAGACCG ACGCGCTGCG GATTCCGGGC CATGCGCATT CGGCGCGCCA GCGCGCGCTC 
GACGGCGAGG ACGCCAGCGA GCCGTACGGC AGGCTGCCGA ACAGCGACGG CCGCCGTTAC 
GGCGGCGCGG CGGGCGGCTC GTACACGTGG GCGGACGGCT ACGTCGGCGC ATCGTACAGC 
GGCTACGAAT CGAACTACGG CTCCGTCGCC GAAACCGACG CGCGGCTTCA GATGCGGCAG 
GAGCGCGTCG CGCTCGCGTC GGAGGTGCGC AATCTGCGCG GGCCGTTCTC GCAGCTGAAA 
TTCGACTTCG GCTACACGAA TTACCAGCAT AAGGAAATCG AGGACGGCGT GACGGGCACG 
ACGTTTCGCA ATCACGGCTA CGAGGCGCGC GTCGAGGCGC GGCACCGCAA GCTCGGCCCG 
TTCGAAGGCG CGCTCGGCGT GCAGGTCGGA CAGAACACGT TCTCCGCGCT CGGCGGCGAG 
GCGCTCGCGC CTACCACGCG CACGACGAGC GTCGCGCTGT TCGGCCTCGA GCAGTGGCAG 
GCGACCGACG CGCTGAAGCT GTCCGCCGGC GCGCGCATCG AGCACGTGCG GCTCGATCCG 
AGCGCGAACG GCGACGACAA GTTCGGCTTC GCGCGCTCGC GCGATTTCAA TGCGGGCAGC 
GTGTCGGCGG GCGCGCTGTA CCAGCTCGCG CCCGCGTGGT CGCTCGCGGG CAACGTGTCG 
TACACGGAGC GCGCGCCGAC CTTCTACGAG CTGTACGCGA ACGGCCCGCA CGGCGCGACG 
GGACAGTACC TGATCGGCCG GCCCGATGCG CAGAAGGAGA AGGCGGTGTC GACCGATCTC 
GCGCTGCGCT ATGCGAGCGG TCCGAACCGC GGCAGCATCG GCGTGTTCTA CAGCCGCCTG 
CGGAACTACC TCGCCGAATA CGACACCGGA CGGCTCGTCG ACGACGACGG CGTGCCCGTG 
GCCCCGGGCG CCGACGACGC GCTGCGCGAG GCCGTCTATC GCGGCGTGCG CGCGGAGTTC 
TACGGCGTCG AGCTCGAAGG CAGGTGGCGC GCGTTCGAAC GGCGCGGGCA TCGCGTCGAT 
CTCGAGCTGA GCGCCGACTA CACGCACGCG CGCAACGCGG ACACGGGCGA GCCGCTGCCG 
CGGATCGCGC CGCTGCGCGC GACGCTCGCG GCCGATTACG GCTACGGCCC GTTCGGTGCG 
CGCGCGCAGC TCACGCATGC ATGGGCGCAG CATCGCGTGC CCGAGCACGA TCTCGCGACC 
GACGGCTACA CGTCGCTCGG CGTCGTGCTC ACCTACAAGT TGCGCGTCGG CGCGACGAAC 
TGGCTCGCCT ATCTGCGCGG CGACAACCTG ACGAACCAGG ACATCCGCTA CGCGAGCTCG 
GTGGTGCGCA ACATCGCGCC GCAGGGCGGG CGCAGCGTGA GCATCGGGAT GCGCACGACA 
TTCTGA 

 

Protein sequence

MSLLLAASLA HGETGAPPAE RRSDAPPATA LAPIFVTANP LGASALSSPT ASLSGDALTL 
RRTDSLGDTL NGLPGVSTTT YGPLVGRPII RGMDGDRIRL LQNGVAAYDA SSLSYDHAVP 
QDPLSVERIE IVRGPAALLY GGNAVGGVVN TIDNRIPREA ITGVSGALDA SYGGANNARA 
GAALVEGGNG RFAFHLDAFG RETDALRIPG HAHSARQRAL DGEDASEPYG RLPNSDGRRY 
GGAAGGSYTW ADGYVGASYS GYESNYGSVA ETDARLQMRQ ERVALASEVR NLRGPFSQLK 
FDFGYTNYQH KEIEDGVTGT TFRNHGYEAR VEARHRKLGP FEGALGVQVG QNTFSALGGE 
ALAPTTRTTS VALFGLEQWQ ATDALKLSAG ARIEHVRLDP SANGDDKFGF ARSRDFNAGS 
VSAGALYQLA PAWSLAGNVS YTERAPTFYE LYANGPHGAT GQYLIGRPDA QKEKAVSTDL 
ALRYASGPNR GSIGVFYSRL RNYLAEYDTG RLVDDDGVPV APGADDALRE AVYRGVRAEF 
YGVELEGRWR AFERRGHRVD LELSADYTHA RNADTGEPLP RIAPLRATLA ADYGYGPFGA 
RAQLTHAWAQ HRVPEHDLAT DGYTSLGVVL TYKLRVGATN WLAYLRGDNL TNQDIRYASS 
VVRNIAPQGG RSVSIGMRTT F