| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1320 |
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| Symbol | |
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| ID | 4677209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 1310778 |
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| End bp | 1313117 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639843837 |
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| Product | ABC-type export system, outer membrane channel protein |
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| Protein accession | YP_990917 |
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| Protein GI | 121598079 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTACAT CGCATCCGGC TAGCCGCCCG CGCGGGGGGC GGCCGCGCCT CGCCGCGATC
GCGCTCGGCT GCGCGGCGCT CGTCGCCGGT TGCGCGGTGG GGCCCGACTT CATCGCGCCC
GCGCGGCCTG CCGTCGATGC GTACGTGCCG GACGGCGCCG CGCGCACGCG TTTCGCCGCG
AGCGACGCGA CGCAGACGCT CGCACCCGAC GCGCCGTTTC CCGACGCATG GTGGCGGCTG
TTCGGCTCGC GCGAGATCGA CGCGGCCGTT GACGACGCGT TCGCGGGCAG CCCGACGCTC
GCGCGCGCGC GGGCGACGCT CGCTCGCAGC GAGCACGCGC TGATCACGGG CGCGGGCGTG
TTCTATCCGC AGGCCGACGC GCAGGCGGGC GCGTCGCGGC AGCGCTACGT GCCGTTGCGC
ACGGGCGCGA ATCTGCCGGC GTCGCTCTTC AATCTGTTCA CGCTGTCGAC GACGGTCAGC
TATGCGCTCG ACCTGTGGGG CGGCGAGCGG CGCCATGTCG AAGGGCTCGC CGCGCAAGCC
GACGCGCAGC GCCACGCGCT CGCGGCCGCG CGCCTCACGC TCGCGGCAAA CGTCGTCAAC
ACGATGATCG CGCGCGCCGC GTATGCGGAC GAGATCGCGC TCACGCGCGA GCTGATCGCG
CTGACCGACG AGCAGATCCG GCTGACGCGC GCGCAGGTGA GCGCCGGCAC GAGCGCATAC
ACGGCCGTGC TCGCGCTCCA GGCGGCGCGC GCGTCGCTCG ACGCGTCGCT GCCCGCGCTC
GAGCAGAAGA CCGGCGAGGC CGACGATCTG CTCGCGACGC TCGCGGGCCG CTACCCGGCC
GAGCACGTGC CGCCGCAAGT GTCGCTCGCC GCCATCGCAT TGCCGGCGCG GCTGCCGCGG
ACGGTGCCGT CCGAGCTCGT GCGCCGCCGC CCCGACATCC TGCAGGCGGA GGCGGTGCTG
CATGCGGCGA GTGCGAACAT CGGCGTGGCG AGCGCGGCGC TGTTTCCGAG CGTCACGCTA
TCGGCGTCGG GCGGCTTCGA CGCGACGCGC GCGAGCGCGC TGTTCGGCCC GGCGGGCAGG
GCGTGGAGCG TCGGCGCATC GATCACCGCG CCGCTCTTTC ATGGCGGCGC GCTCTGGTAT
CAGCGCAAGG CCGCGGTCGA CGCGTTCGAC GAATCGAACG CCGCGTATCG GCAAACGGTG
CTGAGCGCGT TCGCGCAGGT CGCCGATACG TTGAGGGCGC TCGATCACGA CGCGACGGCG
CTCGACGCGC AAGCGCGCGC GATGCGCGGC GGCTCGCGAC GGTCCAGTAC GAGGCGGGCA
CGGCCGGCTA TCTGCAGGTG CTGCTCGCCG ATCAGCAATA TCGGCAGGCG CGGCTCGCGT
GGGTGCAGGC GAGCGCGCAG CGGCTGCAGG ACACGGTCGC GCTGTACGCG GCGCTCGGCG
GCGGGTGGGG CGGCGCGCGG CAACCCTGAC GCTGCCCGGC GCGGGCGGCC GCCGCGCCGG
CGCTCAGCGC CGCGCCGCTT CCTCGCGTGC CGCGTCGCTC TTCGAGAGCA ACCGCCGCAG
CACGGCCGGC GTGCATTCCT CGACCATCAG GAACCGCGGC AGCGTGAGCA GCGGCGTGTC
GCGCCGGATC TTGCTCGGCT CGAGCGTGAA GCCCGCGACG TAGCCGGCTT CGCGCGCGGC
CGCGCCGAGT TCGCCGTCGA ACGCGCCGAA CGGCCAGGCG AGCAGATCGA CCTGGTTGCC
GATCTCGCGC GCGATGCGTG CGTGCGCCTG CGCGAACTGC GCGCGCGTCG CCTCGCGAAA
CGCGCCGGAA GGCGGCCGGT GCGCGGCGTT CAGATCGGGA TGCCACCACG CGTGCGATTG
CACGTCGAAC CAGCCGGTCT TGTGCAGCAC GCGCAACTGG TGCCACGTGA GCGCGCCGGG
CGCCTCGCCG ATCGCGGACG GATAGACGAA CAGCGTGATC GGCACCCGCT CGCGCAGCGC
GACCGTGCGG GCCCAGTCGA AGATCGATGC GTGCCCTTCG TCGATCGTCA GCGCGATCGC
CTTCGACGGC AGCGCGACGG GCTCGCCGCG CAGCCAGCCG ATCACGTCGC GCAGCGGGAC
GAACCGGTAG CCGAGCCGGC GCAGGTGCGC GAGTTGCGCT TCGAATGTCG CGACGCCGAC
CGTCATCGGA TCGGCGCCGC AGACGTTCGA GAAACGGTGA TAGACGAGCA CGGCGACGTC
GGTCGGCGGC GCGGCGACGG CGGGCGCGCC GCTCGACGCA GTGGTAGCGA CGATCCGCGA
GACGGGCCGA AAGCCGGGGC CGAAAACGGC CGTGCGCCAG GTGAACCGGG AACGAAATGA
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| Protein sequence | MCTSHPASRP RGGRPRLAAI ALGCAALVAG CAVGPDFIAP ARPAVDAYVP DGAARTRFAA
SDATQTLAPD APFPDAWWRL FGSREIDAAV DDAFAGSPTL ARARATLARS EHALITGAGV
FYPQADAQAG ASRQRYVPLR TGANLPASLF NLFTLSTTVS YALDLWGGER RHVEGLAAQA
DAQRHALAAA RLTLAANVVN TMIARAAYAD EIALTRELIA LTDEQIRLTR AQVSAGTSAY
TAVLALQAAR ASLDASLPAL EQKTGEADDL LATLAGRYPA EHVPPQVSLA AIALPARLPR
TVPSELVRRR PDILQAEAVL HAASANIGVA SAALFPSVTL SASGGFDATR ASALFGPAGR
AWSVGASITA PLFHGGALWY QRKAAVDAFD ESNAAYRQTV LSAFAQVADT LRALDHDATA
LDAQARAMRG GSRRSSTRRA RPAICRCCSP ISNIGRRGSR GCRRARSGCR TRSRCTRRSA
AGGAARGNPD AARRGRPPRR RSAPRRFLAC RVALREQPPQ HGRRAFLDHQ EPRQREQRRV
APDLARLERE ARDVAGFARG RAEFAVERAE RPGEQIDLVA DLARDACVRL RELRARRLAK
RAGRRPVRGV QIGMPPRVRL HVEPAGLVQH AQLVPRERAG RLADRGRIDE QRDRHPLAQR
DRAGPVEDRC VPFVDRQRDR LRRQRDGLAA QPADHVAQRD EPVAEPAQVR ELRFECRDAD
RHRIGAADVR ETVIDEHGDV GRRRGDGGRA ARRSGSDDPR DGPKAGAENG RAPGEPGTK
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