Gene BMASAVP1_1318 details

Gene Information

• Locus tag: BMASAVP1_1318
• ID: 4677387
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 1309014
• End bp: 1309718
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639843835
• Product: efflux ABC transporter, ATP-binding protein
• Protein accession: YP_990915
• Protein GI: 121597445
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGATGG CGGGGCTGGC GATCGATGCG CGCGGGCTCA CCAAGTGGTT CGGTGAGGGC 
GAGGCCCGCA CGCGCGCGCT CGCCGACGTA TCGGTGCAGG CGCGCTTCGG CGAGATGCTG 
CTGATCGTCG GGCCGTCGGG CAGCGGCAAG ACGACGCTGC TCAGCGTGAT GTCCGGCATC 
CTGCGGCCCG ACGCGGGCAG CGTGATCGTC GACGGCGTCG ATCTGTGGGC GCAGGACAAC 
GACGCGATCG CCGAATTCCG GCTCAACCGG ATCGGCTTCG TGTTTCAGGA CTACCATCTG 
TTTGCGAGCC TGACGACGGC CGAGAACGTC GCGATTCCGC TGATCCTCAA GCGCCGCGAC 
TGGAACCGCG CGCTCGCCGA CGCGCACGAA TATCTCGACG TCGTCGGCCT GAGGAACCGC 
GCGTCGCTGC CGCCCGTGAA GCTCTCGGGC GGCGAGCAGC AGCGCGTCGC GATCGCGCGC 
GCGATCGTCA GCCAGCCGGA CATCCTGATC CTCGACGAGC CCACCGCGTC GCTCGACGGC 
GACACCGGCC GCACGATCAT CGATTTCGTC AAGCACAAGG TGCTCAACGA CAAGCGCTGC 
ATCGTGATCG TCACCCACGA CAGCCGTATC TTCGACTACG CGGACCGCAT CCTGCGGATG 
GAGGACGGCA AGCTCACGGC GATCGAGCGC GGGGGCGGCC TGTGA 

 

Protein sequence

MTMAGLAIDA RGLTKWFGEG EARTRALADV SVQARFGEML LIVGPSGSGK TTLLSVMSGI 
LRPDAGSVIV DGVDLWAQDN DAIAEFRLNR IGFVFQDYHL FASLTTAENV AIPLILKRRD 
WNRALADAHE YLDVVGLRNR ASLPPVKLSG GEQQRVAIAR AIVSQPDILI LDEPTASLDG 
DTGRTIIDFV KHKVLNDKRC IVIVTHDSRI FDYADRILRM EDGKLTAIER GGGL