| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1309 |
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| Symbol | |
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| ID | 4678093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | - |
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| Start bp | 1299977 |
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| End bp | 1303192 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639843826 |
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| Product | RND efflux system, cytoplasmic membrane extrusion protein |
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| Protein accession | YP_990906 |
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| Protein GI | 121596695 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCGC CGAGCGTCGT TCGTTTTTCC GACGTCAGCC TGCGCTACGG CAAGACCGTC
GCGCTCGAGC GGATCACGCT CGAGATCCCG GCCGGTCTCA CGATCGGGCT GATCGGGCCG
GACGGCGTCG GCAAATCGAG CCTGCTCGCG CTCGCGGCCG GCGCGCGCGC GCTGCAGACG
GGCGCGGTCG ACGCGCTCGG CGGCGACATG CGCTCGCGCC GCCATCGCGA GCGCGTGTGC
CGGCGCATCG CGTACATGCC GCAGGGGCTC GGCAAGAACC TGTATCCGAC GCTCTCCGTC
GAGGAAAACC TGCAGTTCTT CGCGCGCCTG TTCGGCCACG ACGCCGACGA GCGCCGCCGC
CGGATCGACG CGCTCACGCG GAGCACCGGC CTCTTTGCGT TCCTGTCGCG GCCCGCGGGC
AAGCTCTCGG GCGGGATGAA GCAGAAGCTC GGCCTATGCT GCGCGCTGAT CCACGATCCC
GACCTGCTGA TCCTCGACGA GCCGACGACC GGCGTTGATC CGCTCGCGCG CGCGCAGTTC
TGGGATCTGA TCGCGCGCAT TCGCTCGGAG CGGCCGGCGA TGAGCGTGAT CGTCGCGACC
GCGTACATGG ACGAGGCGCA ACGCTTCGAC TGGCTGATCG CGATGGACGC GGGCCGCGTG
CTCGCGACGG GCGCGCCCGC CGAGCTGCTC GCGCGCACCG GCTGCGATTC GCTCGAGGCG
GCCTTCATCG CACTGTTGCC CGAAGACGAA CGGCGCGGCC ACAAGCCGGT GACGCTCGAG
CCGCTGCGCG CCGACGCGCA AACCGGCACC GCGATCGAGG CGCGCGGGCT GACGATGCGC
TTCGGCGATT TCACCGCGGT CGATCACGTG AGCTTCCGGA TCCGGCGCGG CGAGATCTTC
GGCTTTCTCG GCTCGAACGG CTGCGGCAAG TCGACGACGA TGAAGATGCT CACCGGCCTG
CTGCCCGCGA CCGAGGGCAC CGCGCAGCTG TTCGGCAAGA CAGTCGATCC GAAGGACATC
AATACGCGCC GGCGCGTCGG CTACATGTCG CAGGCCTTCT CGCTGTATAG CGAACTGACG
GTGCGGCAGA ACCTCGTGCT GCACGCGCGG CTGTTCGGCG TGCCGGCCGC CGAGATCGAC
GCGCGCGTCG ACGAGATGGC GCGCCGCTTC GGCCTCGCCG ACATCTACGA CATGCTGCCG
GACAGCCTGC CGCTCGGGAT GCGGCAGCGG CTGTCGCTCG CGGTGGCGAT GGTGCACAAG
CCGGAGCTGC TGATCCTCGA CGAGCCGACC TCGGGCGTCG ATCCCGTCGC GCGCGACAGC
TTCTGGCAGT TGATGATCGA CCTCGCGCGC CGCGATCGGG TGACGATCTT CATCTCGACG
CACTTCATGA ACGAGGCGCA GCGCTGCGAC CGGATCTCGC TGATGCACGC GGGCCGCGTG
CTCGCGAGCG ATGCGCCGGC GGCGCTCGTG CGCGCGCGCG GCGCGGCGAC GCTCGAGGAG
GCCTTCATCG GCTATCTCGT CGACGCTTCG GCGCAGGAGG CGCAGGAGGC GCAGGGCGGC
GCGGGCGAGC GCCCCGGCGC GGGCGAGCGC GCGGCGGGCG AAAGCGTGGC CGGTCGCGGC
GCGGCGACCG ATGGCGATGC CGACGGCGCG CATGCGCGGC CCGCCGCGTA CGCGAACGGC
GCGGCGCAAC ATCGCGCGCC CGATGCGGAC GCGGCCGGCA CCGACGTCGC CGCCGAGACG
GGCGCACGCG ACGACGCGCG CACCGCACAC GCGGCCGGAC ATTCCGCCGG AAACGACGTA
CGCGCCACGG TGGGCTCCGA AGTCGGCTCC GAAGTCGCCT CCGAAGCCGG CCTCGCAGCC
AGCGCCGAAA GCGGCTCCGA ACGCGGCGTC GCCCACGGCG CCGAACGTGC ACGCGAACCC
GCGGCGGATG CCGGCGCCGC AATCGACGTC GAACCGGGCG CGAGCGCGGA ATCGGCCACG
GCCGCCGTCG CCCCGGCTCG CCACGCCGAA TCCGCCGCCA CGTCACCCCG CGCAGGGAAC
GCGCCGGCCG GCACGCCGTT CGCCGCCGCG CCGGCCGAGC CGCCCCATCG CGCATTCAGC
GCGCAGCGCG CGCTCAGCTA CATGTGGCGC GAGATGCTGG AGCTGCGCCG CGATCCCGTT
CGCGCGACGC TCGCGCTGAT CGGCTCGCTC GTGCTGATGT GCGTGATCGG CATCGGCATC
AGCCTCGACG TCGAGGATCT GACCTACGCG GTGCTCGACC GCGATCAAAC CGAGCTGAGC
CACGACTACG CGCTGAACCT GTCCGGCTCG CGCTACTTCG TCGAGCGGCC GCCGATCGCC
GATTACGCGG CGCTCGACCG CCGGATGCGC GACGGCGAGC TGTCGCTCGC GATCGAGATT
CCGCCGAACT TCGCGCGCGA CGTCGAGCGC GGCGCGCCCG CGCAGATCGG CATGTGGATC
GACGGCGCGA TGCCGCAGCG CGCCGAGACG ATCCGCGGCT ACGCGATCGG CATGCACACG
ATGTGGCTCG CCGACAAGGC GCGGCACCGC CTCGGCGTGA CGCTCGCGCC GCGCGCGGAA
GTGGTCACGC GCTACCGCTA CAACCCGGAC GTGAAGAGCC TGCCGGCGAT GATCCCCGCC
GTGATGCCGC TGCTGCTGCT GATGTTGCCC GCGATGCTCA CCGCGCTCGC CGTCGTTCGC
GAACGCGAGC TCGGCTCGAT CCTGAATCTG TACGTGACGC CCGTCACGCG CACCGAGTTC
CTGATCGGCA AGCAGGTGCC GTACGTCGTG CTGGCGATGC TGAACTTCCT GCTGATGACG
ATGCTCGCGC GCATCGCGTT CGACGTGCCC GTCAAGGGCA GCTTCATGAC GCTGCTGCTC
GCGGTGCTGA TCTTCAACGT CGTCGCCACG GGCATCGGCC TGCTCGCGTC GACGTTCACG
CGCAGCCAGG TGGCCGCGAT CGTGATGACG ATCATCGGCA CGATGATCCC GACCGTGCAG
TTCGCGGGGC TGCTCACGCC GCTGTCGTCG CTCGAGGGCA CCGGGCGCTT GATCGGCCTC
GTCTATCCGG CCACCTACAT GCTGTCGATC AGCCGCGGCG TGTTCAACAA GGCGCTGTCG
CTCCACGAGC TCTACTCGCA GTTCTGGCCG CTCGCCGCCT GCGTACCGGT GATCCTCGGC
GCGACCATAC TGCTCTTGAA AAAACAGGAA CGCTGA
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| Protein sequence | MSAPSVVRFS DVSLRYGKTV ALERITLEIP AGLTIGLIGP DGVGKSSLLA LAAGARALQT
GAVDALGGDM RSRRHRERVC RRIAYMPQGL GKNLYPTLSV EENLQFFARL FGHDADERRR
RIDALTRSTG LFAFLSRPAG KLSGGMKQKL GLCCALIHDP DLLILDEPTT GVDPLARAQF
WDLIARIRSE RPAMSVIVAT AYMDEAQRFD WLIAMDAGRV LATGAPAELL ARTGCDSLEA
AFIALLPEDE RRGHKPVTLE PLRADAQTGT AIEARGLTMR FGDFTAVDHV SFRIRRGEIF
GFLGSNGCGK STTMKMLTGL LPATEGTAQL FGKTVDPKDI NTRRRVGYMS QAFSLYSELT
VRQNLVLHAR LFGVPAAEID ARVDEMARRF GLADIYDMLP DSLPLGMRQR LSLAVAMVHK
PELLILDEPT SGVDPVARDS FWQLMIDLAR RDRVTIFIST HFMNEAQRCD RISLMHAGRV
LASDAPAALV RARGAATLEE AFIGYLVDAS AQEAQEAQGG AGERPGAGER AAGESVAGRG
AATDGDADGA HARPAAYANG AAQHRAPDAD AAGTDVAAET GARDDARTAH AAGHSAGNDV
RATVGSEVGS EVASEAGLAA SAESGSERGV AHGAERAREP AADAGAAIDV EPGASAESAT
AAVAPARHAE SAATSPRAGN APAGTPFAAA PAEPPHRAFS AQRALSYMWR EMLELRRDPV
RATLALIGSL VLMCVIGIGI SLDVEDLTYA VLDRDQTELS HDYALNLSGS RYFVERPPIA
DYAALDRRMR DGELSLAIEI PPNFARDVER GAPAQIGMWI DGAMPQRAET IRGYAIGMHT
MWLADKARHR LGVTLAPRAE VVTRYRYNPD VKSLPAMIPA VMPLLLLMLP AMLTALAVVR
ERELGSILNL YVTPVTRTEF LIGKQVPYVV LAMLNFLLMT MLARIAFDVP VKGSFMTLLL
AVLIFNVVAT GIGLLASTFT RSQVAAIVMT IIGTMIPTVQ FAGLLTPLSS LEGTGRLIGL
VYPATYMLSI SRGVFNKALS LHELYSQFWP LAACVPVILG ATILLLKKQE R
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