Gene BMASAVP1_1280 details

Gene Information

• Locus tag: BMASAVP1_1280
• ID: 4677237
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 1277086
• End bp: 1277733
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639843798
• Product: OsmY domain-containing protein
• Protein accession: YP_990878
• Protein GI: 121597440
• COG category: [R] General function prediction only
• COG ID: [COG2823] Predicted periplasmic or secreted lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.84893
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCCG ATGCTGCGCT CAAGCAGGAT GTCGAACAGG AACTGTATTG GGATCCGTCG 
CTGGATGCGC GACAGATCGA CGTGTCGGTG CGCGATCGCA TCGTGACGCT GCGCGGCTTC 
GTGCCGAGCT GGGCGCAGAA GTACGCGGCG CAGAAGGCCG CGCAGCGCGT CGCGGGCGCG 
CGGGCGCTGG TGCTCGAGCT GAAGGTGCTG CCGAGCGAAG CGCCGCGCGA CGACGAAGTG 
CTCGCCGCCG CGATCGTGTC GGCGCTCGCG TGGCAGGAAG GGCTCGCCGG GCAGGAGATC 
CACGTCGATG TGGACGAAGG CTGCGTCACG CTCACGGGCG AAGTGGCGTT CGGCTACCAG 
CGGCAGGCGG CCGAGACGGT CGTGAGCCGG ATGCGCGGCG TGATCGGCGT CGTCAACCGG 
ATCGACGTGC GCTCGCGGGA CGCCGGCGCG ACCGTGCGCG AACGTGTGGC GGATGCGCTT 
GCGCGACGTG CGCAGCGCGA GGCCGCGCAC ATCGAAGTCG ACGAGCGCGA CGGCATCGTC 
ACGCTGACGG GCACCGTCGA TTCGCTGATC GAGCGGCGCG CGGCTTGCGG CGCCGCATGG 
TCGGTGAAGG GCGTGCGCGA AGTGATCGAT CATCTGAGCG TCGCATAG 

 

Protein sequence

MKSDAALKQD VEQELYWDPS LDARQIDVSV RDRIVTLRGF VPSWAQKYAA QKAAQRVAGA 
RALVLELKVL PSEAPRDDEV LAAAIVSALA WQEGLAGQEI HVDVDEGCVT LTGEVAFGYQ 
RQAAETVVSR MRGVIGVVNR IDVRSRDAGA TVRERVADAL ARRAQREAAH IEVDERDGIV 
TLTGTVDSLI ERRAACGAAW SVKGVREVID HLSVA