| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1279 |
|---|
| Symbol | cdd |
|---|
| ID | 4678281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | + |
|---|
| Start bp | 1276177 |
|---|
| End bp | 1276569 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639843796 |
|---|
| Product | cytidine deaminase |
|---|
| Protein accession | YP_990876 |
|---|
| Protein GI | 121596453 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0295] Cytidine deaminase |
|---|
| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.910001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCATC ACGCATTGAT CGAAGCGGCG AAGGCCGCGC GCGAAAAGGC CTACGCGCCG
TATTCGAACT TCAAGGTCGG CGCGGCGCTC GTGACGAACG ACGGCAAGGT CTTCCACGGC
TGCAACGTCG AGAACGCGTC GTACGGGCTG TGCAATTGCG CGGAGCGCAC CGCCTTGTTT
TCTGCGCTCG CGGCGGGCTA CCGGCCGGGC GAGTTCGCGG CGATCGCGGT CGTCGGCGAG
ACGCACGGGC CGATCGCGCC GTGCGGCGCG TGCCGGCAGG TCATGATCGA GCTCGGCAAG
CCGACGCTCG AAGTCGTGTT GACGAACATG CAGGGCGACG TGCGCGTGAC GAGCGCGGGT
GACCTGCTGC CGGACGCGTT CTATCTGGCG TGA
|
|---|
| Protein sequence | MTHHALIEAA KAAREKAYAP YSNFKVGAAL VTNDGKVFHG CNVENASYGL CNCAERTALF
SALAAGYRPG EFAAIAVVGE THGPIAPCGA CRQVMIELGK PTLEVVLTNM QGDVRVTSAG
DLLPDAFYLA
|
|---|
| |