| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1276 |
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| Symbol | deoA |
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| ID | 4678192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 1274577 |
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| End bp | 1275908 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639843794 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_990874 |
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| Protein GI | 121597905 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACCA TGACCTTCCT GCCGCAGGAA TTCATCCGCA AGGTGCGCGA CCGCGCGCCG
CTCGACACGG CCGACGTCGC GCGTTTCGTC CAAGGCGTGA CGGCGGGCGA CGTGACCGAA
GGCCAGATCG CCGCGTTCGC GATGGCGGTC TATTTCAACG AGTTGCCGCT GTCCGCGCGC
ATCGCGCTGA CGCTCGCGCA GCGCGATTCC GGCGACGTGC TCGACTGGCG CGGCGCGCGC
CTGAACGGGC CGGTGGTCGA CAAGCACTCG ACGGGCGGCG TCGGCGATCT GACCTCGCTC
GTGATCGGGC CGATGGTGGC CGCGTGCGGC GGCTACGTGC CGATGATCTC GGGCCGCGGC
CTCGGCCACA CGGGCGGCAC GCTCGACAAG CTCGAGGCGA TTCCCGGTTA CGATGTCGCG
CCGTCCGTCG ACATGCTGCG CCGCGTCGTG CGCGACGCGG GCCTTGCGAT CGTCGGCCAG
ACCGCGCAGC TCGCGCCCGC CGACAAGCGG ATCTATGCGG TGCGCGACGT GACGGCGACC
GTCGAATCGA TCTCGCTGAT CACCGCGTCG ATCCTGTCGA AGAAGCTCGC GGCGGGCGTC
GGCGCGCTCG CGATGGACGT GAAGGTCGGC TCCGGCGCGT TCATGCCGAG CGCGGAGCAA
TCGGCCGAAC TCGCGCGCAG CATCGTCGAC GTCGGCAACG GCGCGGGGAT GAGGACGGCC
GCGACGCTCA CCGACATGAA CCAGGCGCTC GCGCCATGCG CGGGCAACGC GATCGAGGTG
CGCTGCGCGA TCGATTTCCT GACGGGCGCG GCGCGCCCCG CGCGGCTCGA AGCGGTCAGC
TTCGCGCTCG CCGCGCAGAT GCTGACGATG GGCGGGCTTG CCGCGGACGC GCACGATGCG
CGCCGCCGGT TGCGCGCGGT GCTCGAATCG GGCGCGGCCG CGGAGCGGTT CGCGCGGATG
GTCGCGGCGC TCGGCGGGCC CGCCGATCTG GTCGAGCGGC CCGAGCGGCA TCTGCCGCGC
GCGGCTGCCG CCGCCCCCGT GGCCGCCGCG CGCGCCGGCT GGATCGAGCG GATCGACGCG
CGCGCGCTCG GCCTGGCGGT CGTCGGCCTG GGCGGCGGGC GCGCGAAGAT CGGCGACACG
CTCGATTACT CGGTCGGACT GTCCGCGCTC GCGGAGCTGG GCGAGCGCGT CGAGGCGGGC
CAGCCGCTCG CGACCGTTCA CGCGCGCGAC GCCGATTCGG CCGCGCAGGC GACCGACGCG
GTGCGGCGCG CCTACCGGAT CGGCGCGGAG CCGCCGGCGC AGACGCGCGT CGTTCATGCC
GTGATCGAAT GA
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| Protein sequence | MQTMTFLPQE FIRKVRDRAP LDTADVARFV QGVTAGDVTE GQIAAFAMAV YFNELPLSAR
IALTLAQRDS GDVLDWRGAR LNGPVVDKHS TGGVGDLTSL VIGPMVAACG GYVPMISGRG
LGHTGGTLDK LEAIPGYDVA PSVDMLRRVV RDAGLAIVGQ TAQLAPADKR IYAVRDVTAT
VESISLITAS ILSKKLAAGV GALAMDVKVG SGAFMPSAEQ SAELARSIVD VGNGAGMRTA
ATLTDMNQAL APCAGNAIEV RCAIDFLTGA ARPARLEAVS FALAAQMLTM GGLAADAHDA
RRRLRAVLES GAAAERFARM VAALGGPADL VERPERHLPR AAAAAPVAAA RAGWIERIDA
RALGLAVVGL GGGRAKIGDT LDYSVGLSAL AELGERVEAG QPLATVHARD ADSAAQATDA
VRRAYRIGAE PPAQTRVVHA VIE
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