Gene BMASAVP1_1236 details

Gene Information

• Locus tag: BMASAVP1_1236
• ID: 4677140
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 1240437
• End bp: 1240943
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639843755
• Product: AraC family transcriptional regulator
• Protein accession: YP_990835
• Protein GI: 121596649
• COG category: [K] Transcription
• COG ID: [COG2207] AraC-type DNA-binding domain-containing proteins

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCGCGTC AAGCCTTCTC TATCCGCGTC CGCCTTCGCG GCCGGCTGCC GAAGGCGCGC 
TTTCGCGCGC CCGACAACCG GCTGCGGCTG CCGACATCGA GCTTGCCGCG CCGGCTCGCG 
CTCGCGAACA ACGAGGCTCA TGCGCAGGCA CTCGGCCAGC TCGACCGCGA GATGGCGCGG 
CTCAATCTCG ACGGGTCGGC GCTTGCCGAC CGTGTTCGCG CGGAATTGAC GTTGACCGAG 
AGCGGTTATC CGTCGCTCGC GCGGCTCGCG TCGAAGCTGT TCCTGTCCGA ACGCACGCCG 
AAACGCCGGT TGCAGGCGCA CGGCACGCCG TATCGGAACA TGCTCGAGGC CGCGCGCTAT 
CGCGACGCGT GCCGGTTGCT GACGCGCACC GATCGGTGCG TCGCCGATGT CTCGACGCGG 
CTCGGCTATG TGAATCCTTC CGCGTTCACG CGCGCCTTTC GCCGCTGGGC CGGCATCGCG 
CCCAGCCGCT ATCGCGACGA CCGCTGA 

 

Protein sequence

MPRQAFSIRV RLRGRLPKAR FRAPDNRLRL PTSSLPRRLA LANNEAHAQA LGQLDREMAR 
LNLDGSALAD RVRAELTLTE SGYPSLARLA SKLFLSERTP KRRLQAHGTP YRNMLEAARY 
RDACRLLTRT DRCVADVSTR LGYVNPSAFT RAFRRWAGIA PSRYRDDR