| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1229 |
|---|
| Symbol | |
|---|
| ID | 4677576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | + |
|---|
| Start bp | 1232743 |
|---|
| End bp | 1233753 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639843748 |
|---|
| Product | C4-dicarboxylate transport sensor kinase |
|---|
| Protein accession | YP_990828 |
|---|
| Protein GI | 121597529 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000923659 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTGC GCGGCATCCG GCGGCTGCAC CGGCCGGCGG CGGTGCTCGC CGTGATCGCG
TGCTGCGTGG CGACGGCCTG GCTCGGCTAT TCGGTCGCGC TGCGCTACTA CTTCCGCGCC
CACATGAACG AGGTGGCGCA GCGCTCGTCG CTGTACGCGC TGACGCTCGA ATCGCAACTC
GCGCGTTACG AATCGATTCC CCGCATCGCC GCGCTCGAGC CGGTGCTGTC GCGCCTCTTG
AACGATCCGG GCGAGCGCGC GCTGCGCGAC GAGGCGAATG CGTATCTCAA CGCGGTGCAG
AAGAACGCCG AGCTGTCCGC CGCGTATGTG ATGAACGCTC GCGGCGAGAC GCTCGCCGCG
AGCAACAGCA ATGAGCCGGG CAGCTTCATC GGCTCGAACT ACGCGTTTCG ACCATACTTC
GCCGACGCGA TGAAGCGCGG ATTCGGCCGC TTCTATGGCG TCGGCAATAC CACCGGGCAG
GCCGGCTACT TTCTGGCCGT GCCGATCCGT AATCCGGGCC AGCCCGCGCG CGCGCCTATC
GGCGTCGTCG CGATCAAGGC CTCGCTCGAT CGATACGAAG CCGCGTTGAC GAAGAGCGGG
GATGTCGTGT TGCTCGTCGA CCGGGACGGC GTGGCGTTTC TGTCGTCCGT CGCAAGCTGG
CGCTATCGCA CGCTGACGCC GATTCCCGCC GCGACGCTTC GCAAGCTCGC CGCGACGAGG
CAGTACGGCG ACGCCGCGCT GGAGCCGTTG TCGGACACGC CGCCCGCGCC CGCCGGAGCG
GGCCGTTCGT CGACGCAGGC CGACTCCCGA ATCGCTCCAT CTGTCTTTAT CCGGCGGGCG
GCCCGCGTGG TATCACGTCG TCTATCGTGC GGCCGGCCCG CTCGGCTGGA GGGTCGCGGT
CCTCGTCGAT TCCACCGACG ACGAGCGCCG GGCGCTGTTC GCCTCCGGCG GCGTGGCGGC
GGCCACCGCT CTCGTATTCG CGCTCATCAT GGTCGCATGG CTTCGCCATA G
|
|---|
| Protein sequence | MRLRGIRRLH RPAAVLAVIA CCVATAWLGY SVALRYYFRA HMNEVAQRSS LYALTLESQL
ARYESIPRIA ALEPVLSRLL NDPGERALRD EANAYLNAVQ KNAELSAAYV MNARGETLAA
SNSNEPGSFI GSNYAFRPYF ADAMKRGFGR FYGVGNTTGQ AGYFLAVPIR NPGQPARAPI
GVVAIKASLD RYEAALTKSG DVVLLVDRDG VAFLSSVASW RYRTLTPIPA ATLRKLAATR
QYGDAALEPL SDTPPAPAGA GRSSTQADSR IAPSVFIRRA ARVVSRRLSC GRPARLEGRG
PRRFHRRRAP GAVRLRRRGG GHRSRIRAHH GRMASP
|
|---|
| |