| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1215 |
|---|
| Symbol | |
|---|
| ID | 4677790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | + |
|---|
| Start bp | 1220011 |
|---|
| End bp | 1220550 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639843734 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_990814 |
|---|
| Protein GI | 121597755 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3652] Predicted outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACACAT TGAGCTTCGC GGCGCTGCTT TCGGCGCTGC CGCTCGCGGC CCACGCGCAG
GATGCGCAAT TGACGGACCC GCAGATCGCG GCGATCGTGG TGACGGCCAA TCAGGTCGAC
ATCGATGCGG GAAAGCTCGC GCAAGGCAGG ACCCATACGA AGCAGGTCAA GGACTTTGCG
AACTTGATGG TCACCGATCA CACCAGCGTG AACGAAGCGG CGGTCGCGCT CGCGACCAAG
CTGAGCCTCA AGCCGGAAGA CAACGCGACG AGCGGCGCGT TGAAGCGAGG CGGGGATGAC
AACATCGCCA CGCTCAGGAC ACTCCGGGGA CATGAATTCG ACAAGGCCTA CATCGGCCAC
GAAGTCGCGT ATCACCAGCA GGTGCTCGAC GCGATGGACA AGGCGCTGAT TCCTGCGGCG
AAGAACGGAG AATTGAAGGC GCTGCTCGTC AAGGTGCGCC CCGCCTTCGC GGCCCATCTC
GAACACGCGC GCGACTTGCA GTCGAAGCTC GGCGGCGATC GTGACAGGAA AGCTGATTGA
|
|---|
| Protein sequence | MHTLSFAALL SALPLAAHAQ DAQLTDPQIA AIVVTANQVD IDAGKLAQGR THTKQVKDFA
NLMVTDHTSV NEAAVALATK LSLKPEDNAT SGALKRGGDD NIATLRTLRG HEFDKAYIGH
EVAYHQQVLD AMDKALIPAA KNGELKALLV KVRPAFAAHL EHARDLQSKL GGDRDRKAD
|
|---|
| |