Gene BMASAVP1_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_1125 
SymbolglnP 
ID4678322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008784 
Strand
Start bp1144024 
End bp1144731 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content65% 
IMG OID639843644 
Productglutamine ABC transporter permease protein 
Protein accessionYP_990724 
Protein GI121597593 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCGGC ACGCGATGCC GCGCCGATCG GAACGCCATC GGGAGCTGAA TGTGCAATTC 
GATTGGTCAG CGATATGGGC GGCGCTGCCG GACTTGATGG ACGGCGTGCG GCTCACCGTT
TTCATCGCAT TCTTCGGGCT GGCGGGCGGT TTTCTCGTCG GCATGATCGC GGGCATGTTT
CGCGCGTACG GCCCTGCCGT GCTGAACGTG CTCGCTCAGG TCTACATCGA GCTGATCCGC
GGCACGCCGA TCGTCGTGCA GGTGATGTTT CTCTATTTCG CGCTGCCGCT GCTCGCGCAC
GTCCGCATCG ACGGCCTGAG CGCGGCGGTC GTCGCGATCA CGCTGAACTC CGGCGCGTAT
CTCGCCGAGG TCGTGCGCGG CGCGCTGCTG TCGATTCCCA AGGGATTGAC GGAAGCCGGG
CTCGCGATGG GGCTGTCGAT GCCGCGCGTG CTCGTGAAGA TCGTCGGGCC GCTCGCGTTC
CGGCGGCTCA TTGCGCCGCT CGGCAACCAG TGCATCGTCA GCCTGAAGGA CACGTCGCTG
TTCATCGTGA TCGGCGTCGG CGAGCTCACG CGCAAGGGCC AGGAGATCAT CGCCGGCAAT
TTCCAGGCGG TCGAGATCTG GACCGCCGTC GCCGCGATCT ATCTCGTGCT CACCGGCGTG
ATGACGCTCA CGCTTCGCTT CGTCGAGAAA AGGATGCGCA TCTTATGA
 
Protein sequence
MARHAMPRRS ERHRELNVQF DWSAIWAALP DLMDGVRLTV FIAFFGLAGG FLVGMIAGMF 
RAYGPAVLNV LAQVYIELIR GTPIVVQVMF LYFALPLLAH VRIDGLSAAV VAITLNSGAY
LAEVVRGALL SIPKGLTEAG LAMGLSMPRV LVKIVGPLAF RRLIAPLGNQ CIVSLKDTSL
FIVIGVGELT RKGQEIIAGN FQAVEIWTAV AAIYLVLTGV MTLTLRFVEK RMRIL