| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1106 |
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| Symbol | |
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| ID | 4677441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | - |
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| Start bp | 1112067 |
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| End bp | 1114685 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639843625 |
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| Product | sensory box diguanylate cyclase/cyclic diguanylate phosphodiesterase |
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| Protein accession | YP_990705 |
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| Protein GI | 121597227 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGTC TACGCACGAT CTATACGAGC GACAGCGCGA CAGGCCACGC TTCGGGCATC
TGGCGGCGGA CCCGCAACGG GCCGCCGCCG GTTCGTTTCC GGCGTTGGCG CGCGCCGGGG
AAATACGAGA CCGCCGCGAC GAAGCGGCGC GGCGGCGGGG CTGAGGCAAG GTGGACGATG
AACGGGACTT CCAGCATGCG CGAACAGGCG CTCGGCATGA ACGACGGGGG TGGCCAGGCG
GCCGAACTGA GGCCGGCGCT CGACGTCTGG CCGATCCTGC TGATGGTGTC GGTGCTCGTG
TGCGTCGTGA TCGTGAGCCT CGCGGTGGTG TCGTTCCTCA GGGTCTACAT CGGCGGCGAG
AGCACGTGGT CGAAGTCGCA GAAGGACGCG GTCATCTACC TGATCCGCTA TGCGGAGACG
GGCGACGAGC GCGCGTACAA GCTCTATGAG GCCGCGATCG ACAAGCCGTA TCGGCTGAGT
CTCGCGCGCG CCGCGCTGCA GCGCAAGCCG CCCGATCGCG CGAGCGCGCG CGAGGCGATC
ATCGCGAGCG GCATCGATCC GACCGACGCG ACCGCGGCCG CGCTGCTGCT GCCCGCGCTC
AGCTGGGTCG CGAAGATCAA CTATGCGCTG CAATGCTGGA TGCAGGCGGA CGTCGAGCTC
GCCGAGTTCC GCAGCGTCGC GAGCCAGCTT CATGCGCTCG TCAGCAGCGG CCATCGCGAC
GACGCCCGCG TGAAGGCGCT CGAATACCGC GCGTGGGAAA TCAACGAACG CGTGTCCGGC
CTGCCCGATC GCTTCTCGAA GGCGTTCAGC GACGAATTCC GTTCGAGCGT CGCGCTGCTG
CTCGTCTGCT ACTTCGTCGC GTCGATGTTC CTGATGTATC TCGCGCTCGT CTGGGCGCGC
AAGGCCGCGC TGCAGCGGCT GTCGATCCAG TACGCGCTCG ATCGCAGCGA GGCGTTCGCC
GAGGCGGCGC TGAGCTCGGT CGCGGAGGCG GTGATCACGG TCGGGCTCGC GAAGAACGTC
GACTTCATCA ACAACGCGGC CGAGCAACTG CTCGGCTACC CGGCCGCCGC GTGCGTCGGC
GCGCCGGTGT CGAGCGTGCT GATGCTGCTC GACAAGGAGA CGGGGCACGC GGTCGACATC
GTCGACGAAT TCTGGGCGCG CGAGGAGCGC ACGCCGATCA AGCGCGAGGT GCATCTGCTG
CGCCGCGATC ATTCGAAGAT CGTTGTGCAG ACAACGATTT CGGAGATGGG CGACCGCGTG
CACGGGCACA TCGGCTACGT GCTGATCCTG CGCAACATGA CGCGCGAGCA GCAGTTCCTC
GAAAGCCTCG CGTGGCAGGC GACGCACGAC GTGCTGACGG GGCTCGTGAA CCGCGTCGAG
TTCGAGCGCC GGCTCGAGAT CGCGCTTGCC GACACGGCCT CCGGCAAGGA GCGCGCCGAT
TCGATGCTGC TGATGCTCGA TCTCGACCGC TTCAAGGAGA TCAACGACAC CTGCGGCCAC
GCGGCGGGCG ACGCGATGCT GCGCGAAGTC ACGCAGCGCT TCCAGAGCTG CCTCGACGAC
GACGACGTGC TCGCGCGGCT CGGCGGCGAC GAGTTCGGCG TGCTGCTGCC GCACGGCGCG
GGATCGTGGC CTTCGAAGAA CAAGGCGGAG CGGCTGCGCC GCAGCCTCGA GGATTTCGTG
TTCCTGTGGG AGGGCGAGCG CTTCACGGTG AGCGTGAGCA TCGGCGTGCT CGAGCTCTGC
AAGGCGCCGC GCAATCTGGA GATGGCCGTC AAGCTCGCCG ACATCGCGTG CTACATCGCG
AAGGAGCGCG GGCGCAACCG CATCCAGCTC GCGGACCCGA GCGATCTGCA ACAGGCGCGC
CATGTCGGCG ACGTGCAATG GAGCCGCCGG ATCAAGACCG CGCTCGAAAA CGACGGCTTT
CGCCTGTACG TGCAGCCGAT CGTCCATACG CGCCCGGATT CGCGGACGCC CGAGCGCGCG
GAGGTGCTGC TGCGCATGAT GGACAGCGCG GGCCGCGACA TCTCGCCCGC CGCGTTCCTG
CCGGCCGCCG AGCGCTACGG GCTGATGGGG CTCATCGACC GCTGGGTGAT CCGCACGGTG
TTCCGCAAGC TGAGCGCGCT GCCCGCGCGC GAGTACCACG AGTACAACGT GAATCTGTCG
GGGGCGTCGA TCTCCGACGA GCGCTTTCTC GAATTCGTGA TCGCCGAGCT GCTGAGCTCC
GGTCTCGAGC CTTCGGTGAT CTGTTTCGAG ATCACCGAGA CGATCGCCGT GAAGAACCTC
GAGCTCGCGT CGCGCTTCAT GGGCGAGCTG CGCACGATCG GCTGCCGCTT CGCGCTCGAC
GATTTCGGCG CGGGCATGTC GTCGTTTCGC TATCTGCGCA GCCTGCCGAT CGATTATCTG
AAGATCGACG GCGAGTTCGT GTCGAACATG ATGTCGGACC GGGTGAGTTA CGGCGTCGTC
AGCGCGATCA ACGAAGTCGC GCACTCGATG CGTTGCAGCA CCGTCGCCGA GCATGTCGAG
TCCGAGGTCG AGCTCGCGAT GCTGCGCGAG CTCGGCATCG ATTTCTGCCA GGGATATTTC
TTTGCTCAGC CTTCGCCGTG GCGCGAGGGC GGCTATTGA
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| Protein sequence | MASLRTIYTS DSATGHASGI WRRTRNGPPP VRFRRWRAPG KYETAATKRR GGGAEARWTM
NGTSSMREQA LGMNDGGGQA AELRPALDVW PILLMVSVLV CVVIVSLAVV SFLRVYIGGE
STWSKSQKDA VIYLIRYAET GDERAYKLYE AAIDKPYRLS LARAALQRKP PDRASAREAI
IASGIDPTDA TAAALLLPAL SWVAKINYAL QCWMQADVEL AEFRSVASQL HALVSSGHRD
DARVKALEYR AWEINERVSG LPDRFSKAFS DEFRSSVALL LVCYFVASMF LMYLALVWAR
KAALQRLSIQ YALDRSEAFA EAALSSVAEA VITVGLAKNV DFINNAAEQL LGYPAAACVG
APVSSVLMLL DKETGHAVDI VDEFWAREER TPIKREVHLL RRDHSKIVVQ TTISEMGDRV
HGHIGYVLIL RNMTREQQFL ESLAWQATHD VLTGLVNRVE FERRLEIALA DTASGKERAD
SMLLMLDLDR FKEINDTCGH AAGDAMLREV TQRFQSCLDD DDVLARLGGD EFGVLLPHGA
GSWPSKNKAE RLRRSLEDFV FLWEGERFTV SVSIGVLELC KAPRNLEMAV KLADIACYIA
KERGRNRIQL ADPSDLQQAR HVGDVQWSRR IKTALENDGF RLYVQPIVHT RPDSRTPERA
EVLLRMMDSA GRDISPAAFL PAAERYGLMG LIDRWVIRTV FRKLSALPAR EYHEYNVNLS
GASISDERFL EFVIAELLSS GLEPSVICFE ITETIAVKNL ELASRFMGEL RTIGCRFALD
DFGAGMSSFR YLRSLPIDYL KIDGEFVSNM MSDRVSYGVV SAINEVAHSM RCSTVAEHVE
SEVELAMLRE LGIDFCQGYF FAQPSPWREG GY
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