| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1060 |
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| Symbol | |
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| ID | 4677022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | - |
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| Start bp | 1068348 |
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| End bp | 1069478 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639843579 |
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| Product | putative outer membrane porin |
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| Protein accession | YP_990659 |
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| Protein GI | 121598123 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAACG CGAAATCGAT CGCGGCGGCG GCGCTCGCCG TCGCGCAGGC GGGCCTCGCC
CACGCACAAT CGTCGGTCAC GCTGTACGGC GCGCTCGATG CGGGCGTTCT GTGGCAGAAC
ACGTCCGCCG CGTCGTTCAG CCCGACGGCG CCGAATACGG GCGCCGTCGT GCGCTTCAAG
GACGGCGGCG TCTATTCGAG CCTCTGGGGC ATCAAGGGAA CGGAGGATCT CGGCGGCGGC
TACCGCGTGA ATTTTCGGCT GCAAGGCGCG TTCGACGGCG GCACCGGCAA GTTCGGGCTG
AGCGACGCGC CCGGTGCGGT CGCCGCGTTC AATCAGATCG CGACGCTCGG CGTGTCCGGG
CCGTTCGGCA CGTTCAACGC GGGCCGGCAG ATCGTACCGA TGATCTACGC GATGGCCGAC
ACCGACGTGC GCGCGGCGCG CTTCTTCGGC AGCGTGCTGA CCGCTTGGCT CGGCCTGAAT
ACCGCGGCCG GCTGGCCGGG CAACAGCACG AACGCGCCGA TCGGCGCGCT CTACGACAGC
GATGCGCTCG TCTACCAGTC GCCCGCGTTC GGCGGCGCGT CGCTCGCGCT CGAGTACGCG
CCGGGCGGTG TGCCCGGCGG CGTGCAGCGC GGCGCGCGCG CGTCGATCGT GCTCAAGTAC
GCGTCGAACG CGCTCAACCT GGCCGCCGTC TATTACAACG GCCACGACAC GAATCCGGCG
CCGGGCGCGA GCGCGACGGG ACTCGACAAC AACCGCTTCG TCTACGTCGG CGCGCAGTAC
AAGCTGAAGG ATGTCGCGGT GTCGGCGTCG TACGGCAACG GCCGGAATCC CGCGCGCGGC
GATCGCGTGA ACCTCGACAT GTTCGCGTTC GGGCTCGGCT ACCGCGTGTC GCCGTTCTTT
CGCGTGAGCT CGGGCGTCTA CTACCTGAAG GACCGGAACC GTTCGGCGAA CCGGTCGACG
TCGATCGTGC TCGGCGCCGA TTACGAGCTG TCCAAGCACA CCACGCTATA TGCGCAGGGG
GGGCGCGTCG ACAATCGCGG CACGATGGCT CAGATGCTGG CGTACGGGCA GCCGGTCGCG
CCGGGGCTCG CGACGACCGC CGCGATGCTA GGGATGCGTC ATTCGTTCTA G
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| Protein sequence | MMNAKSIAAA ALAVAQAGLA HAQSSVTLYG ALDAGVLWQN TSAASFSPTA PNTGAVVRFK
DGGVYSSLWG IKGTEDLGGG YRVNFRLQGA FDGGTGKFGL SDAPGAVAAF NQIATLGVSG
PFGTFNAGRQ IVPMIYAMAD TDVRAARFFG SVLTAWLGLN TAAGWPGNST NAPIGALYDS
DALVYQSPAF GGASLALEYA PGGVPGGVQR GARASIVLKY ASNALNLAAV YYNGHDTNPA
PGASATGLDN NRFVYVGAQY KLKDVAVSAS YGNGRNPARG DRVNLDMFAF GLGYRVSPFF
RVSSGVYYLK DRNRSANRST SIVLGADYEL SKHTTLYAQG GRVDNRGTMA QMLAYGQPVA
PGLATTAAML GMRHSF
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