Gene BMASAVP1_1045 details

Gene Information

• Locus tag: BMASAVP1_1045
• ID: 4678086
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 1050423
• End bp: 1052384
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639843564
• Product: GMC oxidoreductase
• Protein accession: YP_990644
• Protein GI: 121597252
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG2303] Choline dehydrogenase and related flavoproteins

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.640476
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATGGCC GCGCAAAAGG GCGGCGATTC AATGCGATAA CGCACGCACC GTGTTTCGAA 
TTGATGCTCG GCGCAACGCG CTCGACACTA TGGGGTTCTC GTGAGCGGCC GCGGATCGCG 
GCGGCGCGCG CGCCGGGCGC CGCCGCGATC CGGATGCGCG AAGAGGCGCG GGAATGCGCG 
GGACCACGCG GCGCAGGCCG TGCGCCGCAT CGCGCAACGG CGGCCGGCGG GAAAACAGGG 
AGACGAACCG TTCGTGCACC GTCGCGCGCG CGGGCCGGTT CGAACAATCA AAAGGTGAAC 
CGAATGAAGC AGCAGTCCTA CGATTACGAC TACGTCGTGG TCGGCTCCGG CTTCGGCGGC 
AGCGTCTCGG CGCTGCGTCT GTCCGAGAAA GGCTATCGTG TGCTCGTGAT CGAGCAGGGC 
CGTCGCTGGA CGCCCGAGAA CCTGCCGGAA AGCACGTGGA ACCTGTCGCG CTGGCAATGG 
CGCCCCGCGC TCGGGCTGCA CGGCTTCTTC AGCATGCGCT TTTTCAGGCA CGTCGTCGTG 
CTGCACGGCA ATGCGGTGGG CGGCGGCTCG ATCACGTACG CGAACACGCT GCTCGTGCCG 
CCCAACAAGG TCTGGCGCGA GGGCACATGG GCCGGCCTCG AGGACTGGGA ACGCGTGATG 
CCCGCGCACT ACGCCACCGC GAAGCGCATG CTCGGCGTCG TCACGAACCG GCGAATGGAT 
GCGGCCGACT TCCGGCTGAA GGACATGGCG AAGCTGATCG GCGTCGAGAA GAGCTTCTAT 
CCGACCGAGG TCGGCGTGTT CTTCGGCGAC GACGCCGACG CGCCCGGCAC GCGCTACGCC 
GATCCGTACT TCGGCGGCGC GGGCCCGGAG CGCACGTCGT GCATCGGCTG CGGCGGCTGC 
ATGGTCGGCT GCCGCCACGG CGCGAAGAAC ACGCTCGACC GCAATTACCT GTATCTCGCC 
GAGCGCCTCG GCGCGCAGGT GCGCGAGCAG ACGAAGGTCG TCGACGTGCG CCCGCTCGAC 
GCGCGCGCCG ACGGCGCGGC GGGCTACGCG GTCGAAGCGG TGTCGCTCGC GGCGGGCGCG 
CGCGGCGCGA AAAGCCGCCT CACGTGCCGC GGCGTCGTGT TCGCCGCATC CTCGCTCGGC 
ACGCAGGATC TGCTGATGCG CCTGAAGGAA AAGGGCTCGC TGCCCCGGCT ATCGGACGCG 
CTCGGCAAGC GCGTGCGCAC GAACGCCGAA TCGCTGATCG GCGTGCGCTT TCCGAAATCG 
CGCGTCGATC TGTCGAAGGG CGTGGCGATC GGCTCGGGCA TCTACATCGA CGAGCACACG 
CACATCGAGG CCACCCGCTA TCCTTCGGGC TCCGACACGA TGGGGCTGCT CACGACCGTG 
CTCACGCGCG GCGCGCCGGG CGGTTTGCGT GTGCTCGTGT GGCTCGGCGC GCTCGCGAAG 
CTCGTTCTCA CGCGACCGCT GAGCGCGTGG CGGATGATCG ACCCGCGCGG CTTCGCGCGC 
GAGACGATGA TCTTCCTCTG CATGCAGACG CTCGAAGGAC ACCTGACGAT GCGCCTGAAG 
CGCCGCTGGT TCTGGCCGTT CTCGAAGCAG CTCGCGACCT CCGGCGCGAA GATCCCCGCC 
TACATTCCGG CCGCGAACGA CTTCGCGCAG AAGGCCGCGC GCGCGCTCGG CGGCGTGCCG 
ATGACCTCGC TCACCGAGAT CCTGCTGAAC GTGCCGATGA CCGCGCATTG CATGGGCGGC 
GCGGCGATGG CGCGCGACGC GCGCGACGGC GTGTGCGACG GCCGCAGCCG CGTGTTCGGC 
TATCGGAACA TGTACGTCTG CGACGGCTCG GTGCTCGGCG CGAACCTCGG CGTCAACCCG 
AGCCTCACGA TCACGGCGCT CGCCGAGCAT GCGATGAGCC ACGTGCCCGC CGCGCGCGAG 
CAGCGGTGGG ACAGTACCGC GGAGACGCCT GTCGCGGCAT GA 

 

Protein sequence

MNGRAKGRRF NAITHAPCFE LMLGATRSTL WGSRERPRIA AARAPGAAAI RMREEARECA 
GPRGAGRAPH RATAAGGKTG RRTVRAPSRA RAGSNNQKVN RMKQQSYDYD YVVVGSGFGG 
SVSALRLSEK GYRVLVIEQG RRWTPENLPE STWNLSRWQW RPALGLHGFF SMRFFRHVVV 
LHGNAVGGGS ITYANTLLVP PNKVWREGTW AGLEDWERVM PAHYATAKRM LGVVTNRRMD 
AADFRLKDMA KLIGVEKSFY PTEVGVFFGD DADAPGTRYA DPYFGGAGPE RTSCIGCGGC 
MVGCRHGAKN TLDRNYLYLA ERLGAQVREQ TKVVDVRPLD ARADGAAGYA VEAVSLAAGA 
RGAKSRLTCR GVVFAASSLG TQDLLMRLKE KGSLPRLSDA LGKRVRTNAE SLIGVRFPKS 
RVDLSKGVAI GSGIYIDEHT HIEATRYPSG SDTMGLLTTV LTRGAPGGLR VLVWLGALAK 
LVLTRPLSAW RMIDPRGFAR ETMIFLCMQT LEGHLTMRLK RRWFWPFSKQ LATSGAKIPA 
YIPAANDFAQ KAARALGGVP MTSLTEILLN VPMTAHCMGG AAMARDARDG VCDGRSRVFG 
YRNMYVCDGS VLGANLGVNP SLTITALAEH AMSHVPAARE QRWDSTAETP VAA