| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1018 |
|---|
| Symbol | |
|---|
| ID | 4678468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 1029006 |
|---|
| End bp | 1030307 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639843537 |
|---|
| Product | putative phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_990617 |
|---|
| Protein GI | 121596795 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACC GAACGAACGC AACCCACGCG ACGAACGCGA CGAACGCGAC AAATGCCGCC
CGTGAGGCGT CCGCCGAGCG CCGACGCCTA GGCGGATGGC TGCCCGCCGA GGAGGCGGCG
CTCGCGCGCT ATCGGAAGAC GCTCGCCGCG CATGCGCGCG AGCACGCGGA CGGCGCGCCG
ATGACGGAGG CGGTGCGCGA GCTCGCGGCG CTCGCCGAAG GCGAGCCGCC GCTGCGCATG
GCGCTGACGC GCGCGATCGA CGAGGCGCGC TCGCGCGGCT ACGAGCTCGG CTACGAGACG
ATCGGCGAAC TGATGACGGT GATCGATTTC GTGATGACGT ACGCGCCGCC GTTCAGCGAA
TCCGGGCTCG TGGTCTGCCC GCTGAACGCG CTGCTCGACT GGCCGCTTTG CATGCCGTCC
GGCTACGCGT TCTTTCGCGA CCGCGCGGTG AACGCGCAAC TCAAGCGCGT GCTGAACGTA
TGGTGCGGCT TTCTGGGCGG CCCGCATTCG CGCGCGCACC TGAACGCGTC GGAGCCGGAC
GGCTGGTTCA GCGCGGAGGC CGTGAAGCGG ATCGGCATGT CGCAGTTCCA TTGCGATCCG
CAACTGCCTT ACTGGGGCTT CGCCTCGTGG AACGATTTCT TCACGCGGCG CTTTCTGCCC
GACGCGCGGC CCGTCGCGGC GCCGGACGAT CCGGCCGTGA TCGTCAGCGC ATGCGAGGCC
GCGCCGTATC ACGTCGCGCA CGATCTGAAG CTGCTCGACA CGTTCTGGAT CAAGTCGCAG
CCGTATTCGC TGCGCGACAT CTTCACCGCG GCGCGCGGCG AGCTCGCGCG CGGCTTCGTC
GGCGGCTCGC TGTACCAGGC GTTCCTGAGC GCCTACGATT ATCACCGCTG GCATGCGCCC
GTCGCGGGGC GCATCGCGCA CGCGTATCTC GTCGACGGCA CCTACTATTC GAGCACCGAG
GCCGAAGGCG CGGACCCGGC CGGGCTCAAC GATTCGCAGG GCTACATGAC GGCCGTCGCG
ACGCGCGCGG TGATCGTCAT CGATGCCGAT GCGCCGGAGA TCGGCCGCGT CGCATGCGTG
TTCGTCGGGA TGGGCGAAGT GTCGTCGTGC ATGATCGACG CGCTGCCCGG GCAGCATGTC
GAGAAGGGCG AGGAAATCGG CTACTTCCAG TACGGCGGCT CGACATACTG CATGCTCTTC
GAGCCGGGCG TGATCGGCAG CTTCGTCGCG CATCCGCGTT ATCACGAAGG CGCGCCGGCC
GTGCAGGTGA ACGCGGAAGT GGCGGCCGTC GCGGCGAAGT GA
|
|---|
| Protein sequence | MTNRTNATHA TNATNATNAA REASAERRRL GGWLPAEEAA LARYRKTLAA HAREHADGAP
MTEAVRELAA LAEGEPPLRM ALTRAIDEAR SRGYELGYET IGELMTVIDF VMTYAPPFSE
SGLVVCPLNA LLDWPLCMPS GYAFFRDRAV NAQLKRVLNV WCGFLGGPHS RAHLNASEPD
GWFSAEAVKR IGMSQFHCDP QLPYWGFASW NDFFTRRFLP DARPVAAPDD PAVIVSACEA
APYHVAHDLK LLDTFWIKSQ PYSLRDIFTA ARGELARGFV GGSLYQAFLS AYDYHRWHAP
VAGRIAHAYL VDGTYYSSTE AEGADPAGLN DSQGYMTAVA TRAVIVIDAD APEIGRVACV
FVGMGEVSSC MIDALPGQHV EKGEEIGYFQ YGGSTYCMLF EPGVIGSFVA HPRYHEGAPA
VQVNAEVAAV AAK
|
|---|
| |