Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0960 |
Symbol | |
ID | 4676787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | + |
Start bp | 974133 |
End bp | 974762 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639843479 |
Product | hypothetical protein |
Protein accession | YP_990559 |
Protein GI | 121598011 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGGCG GCTTCGCGAA CGATCGCCTC TACGGCGCGG CGCTCCAATA CCAGCGCGGC GGCCTGACGG TCGGCGCGTC GTACCCGAAG ATGAACCGCG CGCGCAGCGC GGATGCCGCG GGCGCCGTCA CGGGCGACAA CACGTTCGAC GCATCGTCGC AGCAGAACGT CGGCATCGGC GCGACCTACG CATTCTCGAA GGCGCTGATC GGCTTCGCGT ATTCGCACGT CGACGTCTAC GATCCCACCT CGAACGCATA CTTCACCGGC ACGACGCGGC CCGCGGGCGG GCACTGGCAA TCGTGGAAGT TCGACCACTT CGAGATCAAC GGCCGCTATC GCGTGACGCC CGCGTTCTAC GCCGGCGCCG CGTACACGTA TACGCAGGCG CGCGTCGATT CGACGGCCGG CGCATTCCAT CCGAAGTGGC GCCCACTGAG CACGAAGCTC GACTACGATC TGTCGAAGCG CTCGTCGGGG TTCGCCGAAG GCGTCTACCA GCACGCGCAG CACGCGATGA ATGCGCGCAC GGGCACCGAT TTCGACCATG CGTACATCCC GGGCGCGGCG AATATCGCGT CGGGACCGAA CCAGTACGTC GTGCGGCCCG CGCTGCCGCA CCCGTTCTGA
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Protein sequence | MAGGFANDRL YGAALQYQRG GLTVGASYPK MNRARSADAA GAVTGDNTFD ASSQQNVGIG ATYAFSKALI GFAYSHVDVY DPTSNAYFTG TTRPAGGHWQ SWKFDHFEIN GRYRVTPAFY AGAAYTYTQA RVDSTAGAFH PKWRPLSTKL DYDLSKRSSG FAEGVYQHAQ HAMNARTGTD FDHAYIPGAA NIASGPNQYV VRPALPHPF
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