Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0938 |
Symbol | pvcB |
ID | 4677602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | - |
Start bp | 952829 |
End bp | 953728 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639843457 |
Product | pyoverdine chromophore biosynthetic protein PvcB |
Protein accession | YP_990537 |
Protein GI | 121596468 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2175] Probable taurine catabolism dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGATC TCTTCCTGCA GCGGGCGGTG TCGCTCGAAC CGTTGACGAG CGACGCCGGC GCGCCCTGTT CGTTCGGCGT GCTCGTGAAG CCGCGCCGCG CGCGCACGCA CGTCGGTGAG CTGTCGATCG AGTGGCTGCG CGCGCTCGTG CGCAGCCAGC AGCTCGTCGT GCTGCGCGGC TTCGACAGCT TCGCCGATGC GCCGGGCATG ACGCGCTATT GCGCGGCGTT TGGTGAAATC ATGATGTGGC CGTTCGGCGC GGTGCTCGAG CTGCGCGAGC AGGCGAATCC GGTCGATCAC GTGTTCGCGA GCAGCTACGT GCCGCTGCAC TGGGACGGCA TGTATCTGGA GACCGTGCCG GAATTCCAGG TGTTCCAGTG CGTGCAGGCG ATCGGCGATG CGCACGGCGG GCGCACGACG TTCTCGAGCA CCACGGAGGC GCTGCGCGTG GCGACGCCCG AGACGCGCGC GCTCTGGCAT CGCGCGCACG GCCGCTATCG GCGCACGGTC GAGCTCTACA GCAACACGGT CGAAGCGCCG ATCGTCGAGC GGCACCCGCG CCGCGAATTT CCGATCCTGC GCTTCTGCGA GCCGCCGATC GCGGACGATC CGACGTTCAT CAATCCGTCG AGCTACGCAT TCGGCGGCAT CGCCGACAGC GAGCGGGACG CGCTGTTCGG CAGCCTGACG CGCGCGCTCT ACGATCCGCG CGCGCACTAC GCGCACCGCT GGCGCACGGG CGACGTCGTG CTCACCGACA ACTTCACGCT GCTGCACGGC CGAGAGCGCT TCACGAGCCG AAGCGGCCGC CATCTGCGCC GCGTGCACAT CCATGGCGAT CCGCCGCTGC GCAATCCGCA CCTGTCGAAG CACCCGCACG ACGCGGCCGC TTCGGCCTGA
|
Protein sequence | MNDLFLQRAV SLEPLTSDAG APCSFGVLVK PRRARTHVGE LSIEWLRALV RSQQLVVLRG FDSFADAPGM TRYCAAFGEI MMWPFGAVLE LREQANPVDH VFASSYVPLH WDGMYLETVP EFQVFQCVQA IGDAHGGRTT FSSTTEALRV ATPETRALWH RAHGRYRRTV ELYSNTVEAP IVERHPRREF PILRFCEPPI ADDPTFINPS SYAFGGIADS ERDALFGSLT RALYDPRAHY AHRWRTGDVV LTDNFTLLHG RERFTSRSGR HLRRVHIHGD PPLRNPHLSK HPHDAAASA
|
| |