| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0933 |
|---|
| Symbol | |
|---|
| ID | 4677393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | + |
|---|
| Start bp | 945820 |
|---|
| End bp | 947181 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639843451 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_990531 |
|---|
| Protein GI | 121597488 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATTCCG CAATTATGAT TGCCGCCGCA TCGCATTGCG TTGCCGATGA ACCGATTGCC
GCGCATGAAG AACCAGGGCC GCGACGCGTA CCGGCCCGCC CGGGCCCGCT TGCGCGGCGC
GCGCATGCGA AGCGAAACGA AGCCGGCGGC CGCCGCATCG GCGACGCCGC ACGCCCAATC
CGCGCGCCGG CGGCAGCGAG CCGCGCCGCG CGCGTTCGCG CCCGCCCGAG GTGGCGCCCG
CCCACGATAC GCTGCGCCGC CCCTCCCGCA TGCGGCGCAA CAGCCATCGT CCCGATCCAT
ATCCAGCACC GGGCTCATGT CGCCGAATCG CGATGCAGCG CCCGCGCGAC ATCGGCGCCT
CGCCCGCGAA CGGGCGAGCG CCGCTCGGTA TTTCGAAACA TGACCGTTCT TGAGGTGGGA
AATATGTCCC AGGTGGGGAT AAGAAATTTG AATCACCTGC GCGTTTTCAT GGCGATCGTC
GAGAAGGGCA GCTTCACTGC GGCGGCCGAA TGCCTGAGCA TGTCGAAATC ACTGGTCAGC
GAATACCTGA GCCGCCTCGA AGCCGAGATC GACACGCAGC TCGTGATGCG CAGCACCCGC
CGGATCGCGC CGACCGACGC CGGCAACAAG CTGTATTGCG CGTCGCAGGC GTTCGTGAGC
GGCCTGTACG ACGTGATCGG CAGCATCCGC TGCCTGCGCC ACGAATCGAC CGGCCTGTTG
CGCGTCGCGG CGCCGAGCGG CTTTTCCACC ACGCATCTAA GCTCGATCGC CGCGACCTTC
ATTCATCAGC ATCCGCAGAT CGAGCTCGAG ATCGTCTGCA ACGACGACGA GATCGATCTG
GTGGGCGAGC GCGTCGATCT CGCGTTCGAA ACCGGATGGC CCAAGAAGAA GGGCTTCCGG
ATGAAGATGC TCGGCGCATT CGATCAGGTG CTCGTCGCGT CGCCCGAGTA TTCGCGCAGG
CACGCGGTGC CGCGGCATCC GGACGATCTG CCCGGCTCGC ACTGGATCGG GCACGGCGGG
CTCGCCAATC TCAGCTATTC GGTGTTCGGC AACGAGGGGC GATCGGTCCG GATTCAGCCC
CCCGGGCGCC TGAAGGTGAA GAGTGTGCTG CTCGCGCATC AGATGGCGCT CGCCGGCGCG
GGCATCAGTG CGTTTCCCGA TTATCTGGTC GCCGAGGATC TGCGCGAAGG GCGCCTGCAT
CGGCTGCTGC CGACGTGGAC GATGCCGAAG GGCGGCATCT ACGCGTTTCG CACGGCGCCG
CGGCAGGCGT CGGTTCGCGA GCGCCTGTTT CTCGCCGCGG TCCAGGCGTA TCTGGCCGGC
CTGTGCGGCG AGCACGCGCG CGCGGGCGCG GTCCCGACCT AG
|
|---|
| Protein sequence | MNSAIMIAAA SHCVADEPIA AHEEPGPRRV PARPGPLARR AHAKRNEAGG RRIGDAARPI
RAPAAASRAA RVRARPRWRP PTIRCAAPPA CGATAIVPIH IQHRAHVAES RCSARATSAP
RPRTGERRSV FRNMTVLEVG NMSQVGIRNL NHLRVFMAIV EKGSFTAAAE CLSMSKSLVS
EYLSRLEAEI DTQLVMRSTR RIAPTDAGNK LYCASQAFVS GLYDVIGSIR CLRHESTGLL
RVAAPSGFST THLSSIAATF IHQHPQIELE IVCNDDEIDL VGERVDLAFE TGWPKKKGFR
MKMLGAFDQV LVASPEYSRR HAVPRHPDDL PGSHWIGHGG LANLSYSVFG NEGRSVRIQP
PGRLKVKSVL LAHQMALAGA GISAFPDYLV AEDLREGRLH RLLPTWTMPK GGIYAFRTAP
RQASVRERLF LAAVQAYLAG LCGEHARAGA VPT
|
|---|
| |