| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0928 |
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| Symbol | |
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| ID | 4677860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 940924 |
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| End bp | 943596 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639843447 |
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| Product | SciS protein |
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| Protein accession | YP_990527 |
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| Protein GI | 121597230 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGT TCCTGTCCTT TCTGGTGTCT CGATCGTTCA TCGCGTTCGT CGCGCTGCTC
GCCGTCGCGC TCGTCATCTG GTTCGTCGGC TCGTTCGTCG CGTTCGGCGG GCTCACGCCG
CTCGCGGGCG CGGGCATGCG CGTCCTCGCG ATCGCGCTGC TGCTGGCGGG CGTGCTGCTG
TGGCTCGCGG GCCGGCCGAC GAGCATCGTG TTCGTCGCGC TGCTGTGCGT GCTGATCTGG
CATGCGTCGC CGCTGCTCGC GTTCGGCGGC GCGACGCCGT TCGCGGCGGA GGCGGTCCGG
GCGATCGCGA TCGCGCTCGT GCTCGCGGCG TTCGCGCTGC ACCTTGCGTT CCGGCTGCTG
CAAAAGGCGC GCACCGATCC GGATTTTCTG AAGAGCTTGC TCGAATTCGG CGGCAAGCAG
CCCGAATCGC CCGCGGCCGG CCGCCTGGCG GCGGTCAACG CCGCGATCGC CGGCGCGATC
GCGCGCCTGA AAGGCATGCG CAGCGGCGCG CGCGGCCTGC GCCGCCTGTT GCGCGGCAAG
CGCTATCTGT ACGAACTGCC GTGGTACGTC ACGCTCGGCT CGCGGGCATG CGGCAAGACG
AGCGCGCTCC TGAACGCCGG GCTCTCGTTT CCGGTCGCGG CGCAAATGCC GCGCGCGGCA
GCCGGGCTGC CGGATCACGG CGGCTCGGTC GACTGGTGGT TGACCAACGA TGCGGTGCTG
ATCGACACGG CCGGCCATTA CACGCGTCAC GGCACGTCGG CGCACGCGGC GCCGCTGCCG
CCCGCCGGGC CCGCGCCGCA CGCCCAGCCC GCCGACGCGG CCGCCGACGC GCGCCGCGCG
AACGGTCAGC CGGCGGGCGA GCGGCACGCC GTCGCGATGG CCGCGGCGGC GCCGTCGAGC
GCCGCGTTCG TCGACGAGCG GCAGGCGCAA TGGCGGCAGA CCGTCGACCA GGCCGAATGG
CTGGGCTTTC TGCGGACGCT GCGCAAGCAT CGGCCGCGCG AGCCGATCAA CGGCGCGCTG
CTCGCCGTCG ACGTCGCCAC GCTCACGAGC GCCGACGACA ATGCGCGCCA TGCCGAGGCA
GCCGCGCTGC GCGCGCGGCT CGCCGATCTG CGCGCGCAAC TGGGCGTGCG CTTTCCCGTC
TATCTGATCG TCACGAAGAC GGACCAGTTG CCGGGCTTCG CCGAATACTT CAGCGCGCTG
ACCACGGAGG GCCGCGCGCA GACGTGGGGG TTCACGCTGC CGTACGACAA GGAGACCATC
GCGGACGAAG GCGTCCACGC GCGCTGCGCC GACGAGCTGC GCGCGTTGGC CGCGCGGCTC
GCCGCGGGCG TGAACACCCG CCTGCAGGAA GAGCACGACA CGCAGCGGCG CCGCCGGCTC
GCCGCGCTGC CGGAGGAATT TCTCGTGCTG ACACGCCCGC TCGGCGAGCT GATCGATCGC
GTCTTCGCCG ATTCCCGCTA CGACGACACG CAGCATCACG CGACGCTGCG CGGCGTGTAT
TTCACGAGCG CCGCGCAGAC GGGCGGCGAG GCCGCCGCCG AAACGCGCAC CGTCGCGCGA
CGCCTCGCCG CCGCGACGGG CCGCGCGCCG GCCGCGGCCG CGCGCGCGGC GCAGCAGGAA
ACCAGCCAGA GCTTCTTCCT GCACGATCTG CTGACGAAGA TCGTCATTCC GGACGCACGC
CTCGTCCAGC CGAACCTTCG CTGGGAGTAT CGCTCGCGCA CGCTGAGCCT CGCCGCTCAC
GCGCTCGCGC TGCTGCTGTT CGCGTGGGTC GCGATCGGCC TGCGCGTCAG CATGGGCAAC
AACGATGCCT ATCTCGACGC GCTCGCGCGC AAGACGGCGG CGCTCGCCTC CCGGGTCGAC
CAGTTGTACA AGGCGCCGAA GCCCGAGGCC GTGCCCGACG TGCTGACGCA AGCCCGCTCG
CTGAGCGCGT ACCCGGGCCT CGATCTGTCC GCGGCGGGCA GCGGCTGGCG GTTCGGCCTG
TACACGCCGC CCGGCATCGT CGCCGAAAGC AGCCGCACGT ACGACGCGCT CGAGGACACC
CTGCTGCTGC CGCGGATCGT CACGCGCATC GAGGCGGTGC TGTCGCAGGC GATCGCCGAT
CGCGATCCGA AGGCCGCGTA CGACGCGCTG CGCGTCTATC TGATGCTGTA CGACCGGGCC
CGCTTCGATG CCGCGCAGGT CGAGGCGTGG GTGCTCGACG ACTGGGCGCG AACCGACAGC
GCGGCGGTCT TCGGCGGCCG CGCGTCGATG ATCGCGCACG TCGAGCAACT GTTCCGCGGC
GAGCGCATCG TGCAATCCCC GCTGATCCGC AACGATGCGC TGATCCGCCA GGCGCGCGCG
TTCCTGGACG GCAGCAACGC GACCGAGCGG CTCTACGAGC GCGCGAAGGC GGCGATGAAT
AAAGAAGCGC CCGACGAGTT CACGCTGCTG CGGGCCGTCG GCCCGCAGGC CGGCACGGTG
TTCACGCGCG CGAGCGGCGC GCCGCTCGCG CGGGGCGTGC CGGGCCTCTT CACGTTCGAC
GGATACCGGC GCGTGTTCGA CAAGCGGCTC GCCGAATTCG TGCGGACCGC GCGCGAAGAC
GATGCATGGG TGATGGGCCG CGCGTATCTC GGCGACGCTC AAAAAAAACG GCTGAGATCG
CGAATGCGCT CGCGGGGGCC GACGATCCGC TGA
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| Protein sequence | MNKFLSFLVS RSFIAFVALL AVALVIWFVG SFVAFGGLTP LAGAGMRVLA IALLLAGVLL
WLAGRPTSIV FVALLCVLIW HASPLLAFGG ATPFAAEAVR AIAIALVLAA FALHLAFRLL
QKARTDPDFL KSLLEFGGKQ PESPAAGRLA AVNAAIAGAI ARLKGMRSGA RGLRRLLRGK
RYLYELPWYV TLGSRACGKT SALLNAGLSF PVAAQMPRAA AGLPDHGGSV DWWLTNDAVL
IDTAGHYTRH GTSAHAAPLP PAGPAPHAQP ADAAADARRA NGQPAGERHA VAMAAAAPSS
AAFVDERQAQ WRQTVDQAEW LGFLRTLRKH RPREPINGAL LAVDVATLTS ADDNARHAEA
AALRARLADL RAQLGVRFPV YLIVTKTDQL PGFAEYFSAL TTEGRAQTWG FTLPYDKETI
ADEGVHARCA DELRALAARL AAGVNTRLQE EHDTQRRRRL AALPEEFLVL TRPLGELIDR
VFADSRYDDT QHHATLRGVY FTSAAQTGGE AAAETRTVAR RLAAATGRAP AAAARAAQQE
TSQSFFLHDL LTKIVIPDAR LVQPNLRWEY RSRTLSLAAH ALALLLFAWV AIGLRVSMGN
NDAYLDALAR KTAALASRVD QLYKAPKPEA VPDVLTQARS LSAYPGLDLS AAGSGWRFGL
YTPPGIVAES SRTYDALEDT LLLPRIVTRI EAVLSQAIAD RDPKAAYDAL RVYLMLYDRA
RFDAAQVEAW VLDDWARTDS AAVFGGRASM IAHVEQLFRG ERIVQSPLIR NDALIRQARA
FLDGSNATER LYERAKAAMN KEAPDEFTLL RAVGPQAGTV FTRASGAPLA RGVPGLFTFD
GYRRVFDKRL AEFVRTARED DAWVMGRAYL GDAQKKRLRS RMRSRGPTIR
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