| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0925 |
|---|
| Symbol | |
|---|
| ID | 4676799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | + |
|---|
| Start bp | 937670 |
|---|
| End bp | 938173 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639843444 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_990524 |
|---|
| Protein GI | 121597485 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCGA CCACCCCCGT TGCCGCCGTC GCGCTCGCGC TCGCGTGCGC CGCGTGCGCG
AGCGGCGCGG CCAAGCAGAA GGAGCCGCTG CGGCTCGAGC TCGCCGTGCG CGCCGCGCCC
ACGGTCAATC CGGACGATCG GAGCCGGCCG GCTCCGATCG TCGTGAGCGT CTACGAGCTG
AAGACCGACG GCGCATTCAA CGCCGCCGAT TTCTTCACGC TGCAGGGCCC GGACAAGACC
GTGCTCGCCG ACGATCTGCT CGCGCGCGAG CGTTTTCAAC TGCGCCCCGG CGAGCGCCGC
GTGATCCGGC GCGACGCCGA TCCGGCGGCG GGCACGCTCG GCGTGGTCGC CGCGTACCGC
GATCTGCCGA ACTCGGTGTG GCGCGCGGCA TATCCGCTGC CGCCCGCGCG GGACGCCGCA
TGGTATCGCT TCTCGTCGCC GAAGCTGAAG CTGACCATCG AGCTCGACAC GCACGCGATC
AGGATCACCG AACCCGGAAA ATGA
|
|---|
| Protein sequence | MHPTTPVAAV ALALACAACA SGAAKQKEPL RLELAVRAAP TVNPDDRSRP APIVVSVYEL
KTDGAFNAAD FFTLQGPDKT VLADDLLARE RFQLRPGERR VIRRDADPAA GTLGVVAAYR
DLPNSVWRAA YPLPPARDAA WYRFSSPKLK LTIELDTHAI RITEPGK
|
|---|
| |