| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0914 |
|---|
| Symbol | |
|---|
| ID | 4677559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 926100 |
|---|
| End bp | 927185 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639843433 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_990513 |
|---|
| Protein GI | 121597221 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCG ACATGACGCA GGCGGCCGTT GCCGACACGG CGCTGTCGCC GCAAGCGCTC
GCGCGGCTGC GCGCCGAACC GTGGCGCTAT GGGTTCCTCG CGCTGCTGCG CCGCATCGGC
GCGGATGCGC GCATCGATCC GATCGGCAAG GCGAGGCGCC CGCAGGCGGA GCCGTTTCGC
CTCGGCCAGC AGCCGAGCCT CGCGTTCGCG CCGCGCGAGA TCGCCAGCGT CGGCGACGCG
AACGGGCGGC TCAAGGTGCG GCTGTTCGGG CTCGGGATGC TGGGGCCGAA CGGGCCGCTG
CCGATCCACG TGACGGAGAT CGCGCGCGAT CGCGAGGAGA GCCGGCGCGA TCCGACGCTC
GGCAATTTTC TCGATATCTT CCATCATCGC TATCTGACGC TGCTGTATCG CGCGTGGGCG
TCGGCGCAGG CGGCGGCCGG CCTCGATCGT CCGGATGACG AACGGTTTTC GTTCTACGTC
GCGAGCCTCG CCGGCCAGGA TCTCGACGAG GTCGGCGCGC GGCCGCTGCC CGCGCACGCG
CGGCTGTCCG CCTCGCCGCA TCTGGTGCGC GAGGCGCGCA ACGCGGACGG CCTGCGAATG
ACGCTCGAAC GTTACTTCGG CGTGCCGGTG ACGCTGGAGG AAAACGTATT TCACTGGATC
GCCGTCGATC CGCTCGAGCA CAGCCGGCTC GGCCGGCCCG GCGACGCATC GACGATGGCC
GCGGGCGCGC TGCTCGGCGA GCTGGTGCCG GATCGGCAGC ACAAGTTCCG GCTCGTGTTC
GGGCCGCTCG ACATCGACGC CTATCTGCGC TTCACGCCGC GGGGCGAGGA TCTGCCGCGG
CTCGTCGAAT GGGTGCGGGC GTTCGTCGGC TACGAGTTCG AGTGGGAGCT CGAGTTGCGG
ATCAAGCCGA ACGGCGCGCC GCCCGCCGTG ATGGGCGGCC CGCATCAACT CGGCTGGTGG
GGCTGGCTCG GCCGCTCGCC GTCCGGCGAG CCGGTGACGG GCATGCGTTT CGAACCCGAG
CACTATGCGC ACGGGTTCGC GCGCGGCACG GCTCGCGACA CGCGCGGCAT GCGAGGTGAA
CGATGA
|
|---|
| Protein sequence | MARDMTQAAV ADTALSPQAL ARLRAEPWRY GFLALLRRIG ADARIDPIGK ARRPQAEPFR
LGQQPSLAFA PREIASVGDA NGRLKVRLFG LGMLGPNGPL PIHVTEIARD REESRRDPTL
GNFLDIFHHR YLTLLYRAWA SAQAAAGLDR PDDERFSFYV ASLAGQDLDE VGARPLPAHA
RLSASPHLVR EARNADGLRM TLERYFGVPV TLEENVFHWI AVDPLEHSRL GRPGDASTMA
AGALLGELVP DRQHKFRLVF GPLDIDAYLR FTPRGEDLPR LVEWVRAFVG YEFEWELELR
IKPNGAPPAV MGGPHQLGWW GWLGRSPSGE PVTGMRFEPE HYAHGFARGT ARDTRGMRGE
R
|
|---|
| |