Gene BMASAVP1_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_0880 
SymbolprpR 
ID4677400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008784 
Strand
Start bp888311 
End bp890395 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content74% 
IMG OID639843400 
Productpropionate catabolism operon regulatory protein 
Protein accessionYP_990480 
Protein GI121597017 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR02329] propionate catabolism operon regulatory protein PrpR 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCC TACCCGAAAC CGGCGTGCGG CCGCGCGTCT GGGCGGTCGG CATCAGCCGG 
CTGCGCGCGC TCTTTCGCGA CATCGCCGAC GAATACGAAG AACGCGCCGA TCTGCGGATC
GTCGCGCGCG GCTACGAGGA GGCGATCACG GCGCTCGCGA CGGCGGGCGC CGAGCGCCCC
GACGCGATCG TCGCCGCCGG CTCGAACGGC ACCTATCTGA AGGCGCGCGT GCGCGTGCCC
GTCGTGCTCG TCAATCCGAC CGGCTTCGAC GTGATGCACG CGCTCGCGCG GGCGCGGCGC
GATGCGGGCC GGATCGCGCT CGTCAGCTAC GGCGAGACGC CGCCCGAGGT GCGCAGTTTC
GCGGCCGCGT ACGGGCTCGA CGTCGTGTTC GCGTCGTACC AGAGCGCGCA GGAGGCGGAC
ACGCGCGTGC TCGAGATGCG CGAGCGCGGC ATCGAGACCG TCGTCGGGCC GGGGCTCGTC
ACCGATCTCG CGGCGAACGC CGGGATGGGC GCGGTGTTCG TCTATTCGCA CGCGTCGGTG
CGCGCCGCCG TGAACACCGC GCTCGAGGTC GCGCACGCGA CGCACGCGGA AGCGCTGCGC
CGCGAGCGCC TCGACAACCT GCTGCAGCAC CTGCGCGACG GCGTGGTGGC GCTCGACCGC
GAGGGCCGCA TCGAGGCGAT CAACGAGCGG CTCGCGCTCG CGCTCGGCGT ATCGCCGTCG
GCCGCGGTGG GCCGCGCGCT GGACGATCTG ACGCCCGAGC TGCGCACGCT GCGCGCGGCC
GACGGCGACA CGCTCGCGAC GGTGCGCGGC GTGCGCTACG TCGTGCATCG CGGGCCGCTC
GCCGCGAGCG GCGGCGCGCC CGGCAGCGTG CTGACGTTCC AAGAATCGCG TGCGGTCGAG
CGGCTCGACC GCACGCTGCG CTCGCATCAG CACGCGCAGC AGTTCACCGC GCGCTACCGG
CTCGACGACA TCGTCGGCAC GACGCCCGCG ATCGCGTACG CGCGCGACCT CGCGCGGCGC
TACGCGAAAT CGGACGCGAC CGTGCTGATC CTCGGCGAGA GCGGCACCGG CAAGGAGATG
ATCGCGCAGA GCCTGCACGC GCTGTCCGCA CGCCGCAAGT ATCCGTTCGT CGCGGTCAAC
TGCGGCGCGT TTCCGGAATC GCTGCTCGAG AGCGAGCTGT TCGGCTACGA GGAAGGCGCG
TTCACCGGCG CGCGGCGCGG CGGCAAGGCG GGGCTGTTCG AGGCCGCGCA CCGCGGCACG
CTGTTTCTCG ACGAGATCGG CGAAATGCCC CCGTCGCTGC AAAGCCGGCT GCTGCGCGTG
CTGCAGGAGC GCGAGGTCGT GCGCGTCGGC TCGACCGAGC CGGTTCCGGT CGACATCCGC
GTCGTCGCCG CGACGCACCG GCCGCTCTTC GCCGCCGTCG AGGCGGGCAC GTTCCGCGCG
GATCTCTATT ACCGGCTGAA CATCCTGAAC ATCGGGCTGC CGCCGCTGCG CGAGCGCGCG
GCCGACATTC CGGCGCTCGC CGCGACGCTG CTCGCGCAGG CCGCGCGCCG CGAGCCGCGG
CTCGCCGAGC GGCTGCGCGA CGCCAACGAT GCGGCGCGCG CGCTCGACGC GGCGAACGCC
GCGCTCGCCC GCTATCGATG GCCGGGCAAC GTGCGCGAAT TGCAGAACGT GATCGAGCGC
ATCGCCGTCG AGCTCGCCGA CGCGGGCGAG CGCGGCGATG CGGCCGTGAG CGCCGACACG
CTGCGCGCGA TCGCGCCCGA GGTGTTCGCG CTCGATACGC TCGGCGGGTT CGGCTCGTTC
GGCTCGGCGG CGGGCGGCGG GCACGGCGAC GCGAGCGGCG GAGATATCGA TGCCGATGCC
GACGCGCGAC GCCCGACGCT CGTGCAGCGC CGCCGGCGCG CGGAAGCCGA CGAGATTCGC
GCGGCGCTCG ACGCATGCGG CGGCGACCGC GACCGCGCGT GCGCGAGGCT CGGCATCAGC
AAGACAACGC TGTGGCGCAA GCTCGCGGCG AGCGAAGGGA AAGCGCGAGG CAATAAGCGC
GGCGGCGGCC ACGGCGGCGA CAACGACGAA GGCGCGGGTG CGTGA
 
Protein sequence
MSTLPETGVR PRVWAVGISR LRALFRDIAD EYEERADLRI VARGYEEAIT ALATAGAERP 
DAIVAAGSNG TYLKARVRVP VVLVNPTGFD VMHALARARR DAGRIALVSY GETPPEVRSF
AAAYGLDVVF ASYQSAQEAD TRVLEMRERG IETVVGPGLV TDLAANAGMG AVFVYSHASV
RAAVNTALEV AHATHAEALR RERLDNLLQH LRDGVVALDR EGRIEAINER LALALGVSPS
AAVGRALDDL TPELRTLRAA DGDTLATVRG VRYVVHRGPL AASGGAPGSV LTFQESRAVE
RLDRTLRSHQ HAQQFTARYR LDDIVGTTPA IAYARDLARR YAKSDATVLI LGESGTGKEM
IAQSLHALSA RRKYPFVAVN CGAFPESLLE SELFGYEEGA FTGARRGGKA GLFEAAHRGT
LFLDEIGEMP PSLQSRLLRV LQEREVVRVG STEPVPVDIR VVAATHRPLF AAVEAGTFRA
DLYYRLNILN IGLPPLRERA ADIPALAATL LAQAARREPR LAERLRDAND AARALDAANA
ALARYRWPGN VRELQNVIER IAVELADAGE RGDAAVSADT LRAIAPEVFA LDTLGGFGSF
GSAAGGGHGD ASGGDIDADA DARRPTLVQR RRRAEADEIR AALDACGGDR DRACARLGIS
KTTLWRKLAA SEGKARGNKR GGGHGGDNDE GAGA