| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0815 |
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| Symbol | |
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| ID | 4678027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | - |
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| Start bp | 825939 |
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| End bp | 827138 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639843335 |
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| Product | putative outer membrane porin |
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| Protein accession | YP_990415 |
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| Protein GI | 121597816 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG CGGCAGCAGC ATGGTTGGTG GCGGGGAGCA TGTGCGCCGG CGCGCACGCG
CAAGGCACGG TGACGCTCTA CGGGATCGTC GACGCGGGGC TCGGCTATAC GAGCGACCAG
CGCGTCGCGC AGACCAAGGG GGCGCTCGGC TCGCCCGTCG GCTACCGCAA TGAGTCGAGC
TACGGCTTCG CGAGCGGCAC CTGGTCGGGC AGCCGCTGGG GGCTGAAGGG CAAGGAGGAG
CTGGGCGGCG GTCTCGCAGC CGTGTTCCAG CTCGAGAACG GCTTTAACAT CGGCACCGGA
CAGGCGGGGC AGGGCGGGCG AATGTTCGGC CGGCAGGCGT GGATGGGGCT GTCGAGCGAA
CGCTACGGGA CGCTCACGAT GGGGCGCCAG TACGATCCGA TCGTCGACTT CGTCGGCACG
ATCGGCGCGG GCGCGTTCCT GACCGGCATG GGCGCGCATC CGGGCGATCT CGACAACATC
GACAATCAGG CGCGCGAGAA CAACTCGATC AAGTACGTGA GCCCGAAGTT CGGCGGCCTC
GCGCTCGGCG CGCTGTACGG CTTCGGCAAT CAGGCGGGCA GCGTGAAGAA CCAGAACACG
TGGAGCGTGG GCGGCCAGTA TGTGAACGGG CCGTTCTCGC TCGGCGCCGC GTACCTGTAT
GCGACGAACG CATACGGCGC GAACGGCGGC GCGTGGACGG GTTCGTACGA CGGCACGTTC
GCTTCGTCGA TCAACGAAGG CTTCGCATCG GCGAAGAGCA TGCAGATCGT CGCGGCGGCG
AGCACCTATC AGATCGGCGC GGTGACGCTC GGCCTGTCTT ACAGCAACAC GCGGTACAAA
TCCGGCGCGT TCTCGACGTT CAACGGCACC GCGACGTACA ACTCGATCGG CGGCACCGTA
TCGTGGCAGG CGACGCCCGA GCTGCGCGTC GCGGCGGGCT ATGATTTCAC GCGTGGCAGC
TCGATCGACG GTCAGTCCGC GCCGAAATAC CATCAGGTGA ACTTCGCGTC GTACTACTAC
CTGTCCAAGC GCACCGCGCT GTATGGCCTC GTCGGTTATC AGAAGGCGAG CGGCAAGACG
CTCGATGCGT ACGGCAACGT CGTCGCGGCG ACGGCGTCGG TCGGCGACGT CGGCAACGGC
ATTTCGTCGG CGGGCGATAC GCAGACGCTC GTGCGCATCG GCGTGCGCCA CACGTTCTGA
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| Protein sequence | MKKAAAAWLV AGSMCAGAHA QGTVTLYGIV DAGLGYTSDQ RVAQTKGALG SPVGYRNESS
YGFASGTWSG SRWGLKGKEE LGGGLAAVFQ LENGFNIGTG QAGQGGRMFG RQAWMGLSSE
RYGTLTMGRQ YDPIVDFVGT IGAGAFLTGM GAHPGDLDNI DNQARENNSI KYVSPKFGGL
ALGALYGFGN QAGSVKNQNT WSVGGQYVNG PFSLGAAYLY ATNAYGANGG AWTGSYDGTF
ASSINEGFAS AKSMQIVAAA STYQIGAVTL GLSYSNTRYK SGAFSTFNGT ATYNSIGGTV
SWQATPELRV AAGYDFTRGS SIDGQSAPKY HQVNFASYYY LSKRTALYGL VGYQKASGKT
LDAYGNVVAA TASVGDVGNG ISSAGDTQTL VRIGVRHTF
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