Gene BMASAVP1_0779 details

Gene Information

• Locus tag: BMASAVP1_0779
• Symbol: ahpC
• ID: 4676910
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 797802
• End bp: 798365
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639843302
• Product: alkyl hydroperoxide reductase, subunit C
• Protein accession: YP_990383
• Protein GI: 121596505
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0450] Peroxiredoxin
• TIGRFAM ID: [TIGR03137] peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.867109
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGATCA TCAACAGCCC GATCAAACCG TTCAAGGCCA CCGCATACCA CAACGGCGAC 
TTCGTGCAGG TGAGCGACGA GACCCTGAAG GGCAAGTGGT CCGTCGTCGT GTTCTATCCC 
GCCGACTTCA CGTTCGTGTG CCCGACCGAG CTCGGCGATC TGGCCGAGCG CTACGCCGAA 
TTCCAGAAGC TCGGCGTCGA AATCTACGCG GTGTCGACCG ACACGCACTT CACGCACAAG 
GCATGGCACG ATACGTCGGA CACGATCGCG AAGATCAAGT ATCCGATGAT CGGCGATCCG 
ACGCTCGCGA TCTCGCGCAA CTTCGACGTG CTGATCGAAG AGGAAGGCCT CGCGCTGCGC 
GGCACGTTCG TGATCAATCC GCAGGGCGAG ATCAAGCTGT GCGAGATCCA CGACAACGGC 
ATCGGCCGCG ACGCGGGCGA GTTGCTGCGC AAGGTCCAGG CCGCGCAATA CGCCGCCGCA 
CATCCGGGCG AAGTCTGCCC CGCCAAATGG ACGCCGGGCG CCGACACGCT CACGCCGTCT 
CTCGACCTGA TCGGCAAGAT CTGA 

 

Protein sequence

MPIINSPIKP FKATAYHNGD FVQVSDETLK GKWSVVVFYP ADFTFVCPTE LGDLAERYAE 
FQKLGVEIYA VSTDTHFTHK AWHDTSDTIA KIKYPMIGDP TLAISRNFDV LIEEEGLALR 
GTFVINPQGE IKLCEIHDNG IGRDAGELLR KVQAAQYAAA HPGEVCPAKW TPGADTLTPS 
LDLIGKI