| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0770 |
|---|
| Symbol | |
|---|
| ID | 4678099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 786977 |
|---|
| End bp | 790399 |
|---|
| Gene Length | 3423 bp |
|---|
| Protein Length | 1140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639843293 |
|---|
| Product | transglutaminase domain-containing protein |
|---|
| Protein accession | YP_990374 |
|---|
| Protein GI | 121598066 |
|---|
| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases
[COG4196] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATTC ACGTCGCGCT TCACCACGTC ACCCGCTACC GCTACGACCG GCTCGTCCGG
CTCGGCCCGC AGATCGTGCG CCTGCGCCCC GCGCCGCATT GCCGCACGCC TGTCCTGTCG
TACTCGATGA AGGTCGAGCC CGCGCAGCAC TTCGTCAACT GGCAGCAGGA TCCGTTCGCG
AACTACATGG CGCGGCTCGT GTTTCCCGAG CGCACGCGCA CGCTCGAGAT CGCGATCGAC
CTCGTCGCCG AGATGTCGGT CTACAACCCA TTCGATTTTT TCCTGGAAGA GCACGCGCAG
ACCTTTCCGT TCGACTATGG CGACGCACTG CGCCGCGAGC TCGCGCCGTA TCTCGCGTGC
GATTCCGCCA CGGGCGCCTG CGACGCGTTT CGTTCGTATA TCGAATCGAT CGATCGCGCG
CCGGCGGGCA CCGTCGACTT TCTCGTCGCG CTGAACCGGC GGTTGCAGCA CGACATCCGC
TACGTCGTGC GGCTCGAGCC GGGCGTGCAG ACGCCCGAGC AGACGCTTGC GCTCGCATCG
GGCTCGTGCC GCGACAGCGG CTGGTTGCTC GTGCAGCTGT GCCGTCACCT CGGCCTCGCC
GCACGCTTCG TGTCCGGCTA TCTGATCCAG TTGACGCCCG ACGTGAAATC GCTCGACGGC
CCGAGCGGCG CCGAGGCCGA CTTCACCGAT CTGCACGCGT GGTGCGAAGT GTATCTGCCG
GGCGCGGGCT GGATCGGTTT CGATCCGACA TCGGGGCTGC TCGCGGGCGA AGGGCATATT
CCGCTTGCCG CGACGCCGCA GCCGACGAGC GCCGCGCCCG TCGAGGGGCT CGTCGACGAA
TGCGAGGTCG AGTTCGAGCA CGAGATGCGC GTGACGCGAA TCTACGAATC GCCGCGCGTG
ACGAAGCCGT ATACGGACGA AGCGTGGCAG CGCGTGCTGC GGCTCGGCGC GCAGGTCGAC
GCCGCTTTGA ACGCGGGCGA CGTGCGCCTC ACGCAGGGCG GCGAGCCGAC GTTCGTGTCG
ATCGACGATT GCGACGGCGC GGAATGGAAC ACCGATGCGC TGGGGCCGAC GAAGCGCGGC
CATGCGACGT CGCTCGTGCA GAAGCTGCGC GCGGAGTACG GCGTGGGCGG CTTCCTGCAC
TTCGGTCAGG GCAAGTGGTA TCCGGGCGAG CAACTGCCGC GCTGGGCACT GTCGATATTC
TGGCGCGCGG ACGGCCAGCC CGTCTGGCGC GATCCGGCGC GCTTCGCCGA CGAGCGCGAA
CCGTCCGCGT ACACGAGCGC CGACGCCGAG CGCTTCATTC GCGCGCTCGC GGCGCGTCTC
GGGCTCGCGG GCGATTACGT GACGCCGGGC TACGAAGACG TCTGGTATTA CCTGTGGCGC
GAGCGGCGGC TACCCGTGAA CGTCGATCCG TTCGACGCGC GGCTCGACGA CGAGCTCGAG
CGTGCGCGTC TGCGCAGGGT GTTCTCGCAG CAGTTGGACA GCGTGATCGG CTACGTGCTG
CCGCTCAAGC CGCTCGCGCC GAATCCGGCG CTCGCGGGGC CGCGCTGGGA GACGGGCCCG
TGGTTCTTCC GCGATGAGCG GATGTATCTC GTGCCGGGCG ATTCGCCGAT GGGCTATCGC
CTGCCGCTCG ATTCGCTGCC GTGGGCGAGC CGCGGCGACT ATCCATATCT CGTCGAGCGT
GATCCGTTCG CGCCGCGCGA CGCGTTGCCC GATGCGGATG CGCTGCGCGC GCGCCATGTC
GGCGGCGGCT TCGGCGCACC TCGCGATCCG GGCGCGGCGG CGCGCGACGC CGACGCGCCC
GCGCGGCCCG TGATGCAGGC GCGCGCCGGC GAACGCGCGT TCGCGCGGCC GGCGGGCGAG
GCCGAGGCCG CGCGCTTCCC GCAGCGCTTC GAGTCCGCCG GGTGGATCAC GCGCACCGCG
CTGTGCGTCG AGGCACGCGG CGGCGTGCTC TACGTGTTCA TGCCGCCGAT CGCCGCGCTC
GAAGACTATC TCGACCTGTT GGCCGCGATC GAGCTGACCG CCGAATCGCT CGACGCGAAG
CTCGTGCTCG AAGGCTACCC GCCGCCGCGC GACGCGCGGC TGAAGATGCT GCAGGTGACA
CCCGATCCCG GTGTGATCGA AGTGAACATC CATCCCGCGC ACGATTTCGA CGAGCTCGTT
CAGCACACCG AATTCCTGTA CGACGCCGCG TATCGATCGC GGCTGTCGAG CGAGAAGTTC
ATGGTCGACG GCCGGCATGT CGGCACGGGC GGCGGCAATC ACTTCGTGCT CGGCGGCGCG
ACGCCCGCCG ACAGCCCGTT CCTGCGCCGT CCCGATCTGC TCGCGAGCCT GATCGCGTAT
TGGCACAATC ATCCGTCGCT GTCCTACCTG TTCTCGGGGC TCTTCATCGG CCCGACGAGC
CAGGCGCCGC GCGTCGACGA GGCGCGCGAC GATCAGGTCT ACGAACTCGA TATCGCGTTC
GCCGAGCTTC GCCGCAACAC GCTGCGCGCG GGCGAGGACA TGCCGCCGTG GCTCGTCGAT
CGCGTGCTGC GCAATCTGCT GATCGACGTG ACGGGAAACA CGCATCGCAG CGAATTCTGC
ATCGACAAGC TCTATTCGCC GGATTCGGCG ACGGGGCGCC TCGGCCTGCT CGAGCTGCGC
GCGTTCGAAA TGCCGCCGCA CGCGCGAATG AGCATCGTCC AGCAATTGCT GTTGCGCGCG
CTGATCGCGC GCTTCTGGCG CGTGCCGTAC ACGGCGCCGC TCGCGCGCTG GGGCACCGCG
CTGCACGATC GCTTCCTGCT GCCGAGCTTC GTCAGGATGG ATTTCGACGA CGTGCTGACC
GAGCTGCGCG AAGCGGGCTT CGGGTTCGAC GCGGCGTGGT TCGCGCCGCA CTTCGAATTC
CGTTTTCCGC TGTTCGGGCA GATCGCCGCG CGCGGCGTCG CGCTCGCGCT GCGCGGCGCG
CTCGAGCCGT GGCACGTGAT GGGCGAGGAG GGGGCGATCG GCGGCACCGT GCGCTACGTC
GATTCGTCGC TCGAGCGGCT CGAAGTCCGG GTGAGCGGGC TGAACGACAG CCGCTACGTC
GTGACCGTCA ACGGCCGCGC GCTGCCGCTG CAGCCGACGG GCACCGCCGG CGAGTACGTC
GCGGGCGTCC GCTACAAGGC ATGGGCGCCG CCTTCGGCGC TGCATCCGAC GATCGGCGTA
CACGCGCCGC TCACGTTCGA CATCGTCGAT ACATGGATGC GGCGCTCGCT CGGCGGCTGC
CGGTATCACG TCGCGCATCC GGGCGGGCGC CACTACGACA CGTTCCCCGT GAACGCTTAC
GAAGCCGAGA GCCGGCGGCT CGCGCGCTTC GTGTCGATGG GGCACACGCC GGGCGCGATG
ACGGTCGAGC CGGCCGCGCC GGGCCGCGAA TTTCCGTTCA CGCTGGATTT GCGGCATGGG
TGA
|
|---|
| Protein sequence | MSIHVALHHV TRYRYDRLVR LGPQIVRLRP APHCRTPVLS YSMKVEPAQH FVNWQQDPFA
NYMARLVFPE RTRTLEIAID LVAEMSVYNP FDFFLEEHAQ TFPFDYGDAL RRELAPYLAC
DSATGACDAF RSYIESIDRA PAGTVDFLVA LNRRLQHDIR YVVRLEPGVQ TPEQTLALAS
GSCRDSGWLL VQLCRHLGLA ARFVSGYLIQ LTPDVKSLDG PSGAEADFTD LHAWCEVYLP
GAGWIGFDPT SGLLAGEGHI PLAATPQPTS AAPVEGLVDE CEVEFEHEMR VTRIYESPRV
TKPYTDEAWQ RVLRLGAQVD AALNAGDVRL TQGGEPTFVS IDDCDGAEWN TDALGPTKRG
HATSLVQKLR AEYGVGGFLH FGQGKWYPGE QLPRWALSIF WRADGQPVWR DPARFADERE
PSAYTSADAE RFIRALAARL GLAGDYVTPG YEDVWYYLWR ERRLPVNVDP FDARLDDELE
RARLRRVFSQ QLDSVIGYVL PLKPLAPNPA LAGPRWETGP WFFRDERMYL VPGDSPMGYR
LPLDSLPWAS RGDYPYLVER DPFAPRDALP DADALRARHV GGGFGAPRDP GAAARDADAP
ARPVMQARAG ERAFARPAGE AEAARFPQRF ESAGWITRTA LCVEARGGVL YVFMPPIAAL
EDYLDLLAAI ELTAESLDAK LVLEGYPPPR DARLKMLQVT PDPGVIEVNI HPAHDFDELV
QHTEFLYDAA YRSRLSSEKF MVDGRHVGTG GGNHFVLGGA TPADSPFLRR PDLLASLIAY
WHNHPSLSYL FSGLFIGPTS QAPRVDEARD DQVYELDIAF AELRRNTLRA GEDMPPWLVD
RVLRNLLIDV TGNTHRSEFC IDKLYSPDSA TGRLGLLELR AFEMPPHARM SIVQQLLLRA
LIARFWRVPY TAPLARWGTA LHDRFLLPSF VRMDFDDVLT ELREAGFGFD AAWFAPHFEF
RFPLFGQIAA RGVALALRGA LEPWHVMGEE GAIGGTVRYV DSSLERLEVR VSGLNDSRYV
VTVNGRALPL QPTGTAGEYV AGVRYKAWAP PSALHPTIGV HAPLTFDIVD TWMRRSLGGC
RYHVAHPGGR HYDTFPVNAY EAESRRLARF VSMGHTPGAM TVEPAAPGRE FPFTLDLRHG
|
|---|
| |