| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0759 |
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| Symbol | ppd |
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| ID | 4677883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 774346 |
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| End bp | 775464 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639843282 |
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| Product | 3-phosphonopyruvate decarboxylase |
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| Protein accession | YP_990363 |
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| Protein GI | 121596448 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4032] Predicted thiamine-pyrophosphate-binding protein |
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| TIGRFAM ID | [TIGR03297] phosphonopyruvate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.762667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCTGCT CGTATCTGAC GCCGTTCATC AATTACGTGC TGCAGGACCC GGCGCTCCAT
TACGTATCGG CGGCCAACGA AGGCGACGCG GTCGCGCTCG TCGCGGGCGC GACGCTCGGC
GGCCGGCGCG GGATCGCGAT GATGCAGAAC TCGGGGCTCG GCAACGCGGT GAGCCCGCTC
ACGTCGCTCA CGTGGACGTT CAGGCTGCCG CAGCTCCTGA TCGTCACGTG GCGCGGCCAG
CCGGGCGTGC CCGACGAGCC GCAGCACGCG CTGATGGGCC CGATCACGCC CGCGATGCTC
GACACGATGG AAATTCCGTG GGAGACGTTC CCGACGCAGG CCGACGCGAT CGGCCCGGCG
CTCGATCGCG CGATCGCGCA CATGGACGCG ACGGGCCGCC CGTACGCGCT CGTGATGCAG
AAAGGCAGCG TCGCGCCGCA CGCGCTCGAG CATGCCTCGA TGCCCGAGCG CCGCGCGCAC
GCCGCCGCGC GCGTGACGCC CGGCGCGGCC GCGCCTTCGG CATGGCCGAC GCGCCATGAC
GCGCTCGCGC GGATCGTCGC GCGCACGCCG GCCGACTCGA CGGTCGTGCT CGCGTCGACG
GGCTTCTGCG GCCGCGAGCT GTACGCGCTC GACGATCGCC CGAACCAGCT CTACATGGTC
GGCTCGATGG GCTGCGTGAC GCCGCTCGCG CTCGGCCTCG CGCTCGCGCG GCCGGACCTG
ACCGTCGTCG CGCTCGACGG CGACGGCGCC GCGCTGATGC GCATGGGCGC GTTCGCGACG
CTCGGCGCGT ACGGCCCGCC GAACCTCGTG CATCTGCTGC TCGACAACGG CGCGCATGAA
TCGACGGGCG GGCAAGCCAC GGTGTCGCAA TACGTGTCGT TCGCGGGCAT CGCGGCCGCA
TGCGGCTACG CGACGGCGAT CGAGGGCGAC GATCTCGGCG TGCTCGATGC GGCGCTCGAC
GCGGCGCGCG CGGGCGAGCA GGCCGTCGAG CACGGCGGCG CGCACTTCGC GCGCCTGTCG
ATCCGCACGG GCGTGCCCGA CGGCCTGCCC CGCCCGACGG TGACGCCCGT CGACGTGAAA
ACGCGCCTGA TGCGCCACAT CGGCGCGATG CCGGCCTGA
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| Protein sequence | MPCSYLTPFI NYVLQDPALH YVSAANEGDA VALVAGATLG GRRGIAMMQN SGLGNAVSPL
TSLTWTFRLP QLLIVTWRGQ PGVPDEPQHA LMGPITPAML DTMEIPWETF PTQADAIGPA
LDRAIAHMDA TGRPYALVMQ KGSVAPHALE HASMPERRAH AAARVTPGAA APSAWPTRHD
ALARIVARTP ADSTVVLAST GFCGRELYAL DDRPNQLYMV GSMGCVTPLA LGLALARPDL
TVVALDGDGA ALMRMGAFAT LGAYGPPNLV HLLLDNGAHE STGGQATVSQ YVSFAGIAAA
CGYATAIEGD DLGVLDAALD AARAGEQAVE HGGAHFARLS IRTGVPDGLP RPTVTPVDVK
TRLMRHIGAM PA
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