Gene BMASAVP1_0745 details

Gene Information

• Locus tag: BMASAVP1_0745
• ID: 4677654
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: -
• Start bp: 758435
• End bp: 760297
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 639843269
• Product: hypothetical protein
• Protein accession: YP_990350
• Protein GI: 121597956
• COG category: [S] Function unknown
• COG ID: [COG3519] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03359] type VI secretion protein, VC_A0110 family

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTCC TCGATCACTA CAACGACGAA TTGCGCCAGT TGCGCGATGC GGGCGCACGC 
TTCTCCAAGG AGCACCCGCA GGTGGCCTCC GCGCTCGGGC TGCATCCGGA TGCGGTCACC 
GATCCGTTCG TCGAGCGCCT GCTCGAGGGC GTCGCGTACC TGTCGGCGCG CGTGCAGAAG 
CGGCTCGATC GCGAGTGCGC GGAGTTCGCG CAGCAGGCGC TCGGGCGCAT CTGCCCGCTC 
TACACGGCTT CGACGCCCGC GATCTCGACG TTCGCGTTCC ATCCCGATCT CGGCTCGCCC 
GATGCGTTTC GCGGCAACAC GCTGCCGCGC GGCTCGCTCA TCGCCGCGCA CCTGCCCGGG 
CGCAAGCTGC CGGTGATGTT CTCGACCGCG CGCGAGGTCA CGCTGCTGCC GCTGCGTCTC 
GCATCGGTCG AGTGCAGCCG CAGCATCACC GGGCTGCCGT CGCTGCTCGC GCAGCGGCTC 
GCCTCGTCGC ACGCGGTGCT GCGCTTCAGG TTCGAGATCG AGGGCGGCGC GTCGATCGCG 
GAGCTCGCGC GCGAGGACGA CGGCTTCAAG CCGCTGCATC TGAGCGTGGC GGGCGATCTG 
CCGCGCGCAT ATGCGCTGCA CCGCGCGCTG CTCGCCGACA CCACCGCGTG GTACGCGCTC 
GTGTCGACGA ACCGCGGTGA CGAGGTGCTG CCGTTGCCGA TGTCGGGCAT CCGGCTGTCC 
GGCGTCGACG ACGAGGAGGC GCTGCTGCCC GAGGCGTTCG GCGGGCTGCC CGGCCTGCGG 
CTGCTGCGCG AGTACTTCGC GCAGCCCACG CGGCTGCTCG GCGTCTACGT CGACGCGCTG 
GCGGCGATCG CCGCGAAGGC ACCGTCCGCG CGCGCGTTCG ATCTGTTCTT CGCGTTGCGC 
GACGCGCCGG GCGATCTGGT GGGCGACGTC GACGCGAGCC AGTTCCGCCT GTTCGCGACG 
CCGGCGATCA ATCTGTATTC CAAACGTTTC GACCCGGTGC CGTACGACGC GAATCAGCCC 
GAGCAGTGGA TTCCCGTCGA CCGGATGCGG CCCGCCGCGC ATCACCTGTG GGCGCTCACC 
GAGGTGTTCG TGTGCGAGAC CAACGGTCGC GCGCACCGCG CGCGCTCGGT GCTCGAGACG 
GCGGGCTACG AAGGGCACGA AGGCTCGATC CGCTACGGCA TGCGGCGCGA GGACGCGCTG 
CTCGTCGACG GCGTGCGGCG CGACCGGTTC GATCCGCTCG CGAGCCACGA CCTGATCGCC 
GTCTCGATGG TCGACGACAC GCTCGAGCCG GACGACGTCG CGACGATCAC GGGCCGCGCG 
CTCGTGGCCG ATCGCGACTG GCGCCCGAGC GCTCTGCTCG ACGCCGAGCT GCAACTGCTC 
GATCCGACCG CGGTCAAGCG CATCGAGTGC CTGTGGCCGG CGAGCGCGCC GCGCGGCAAG 
CCGAGCATCG ACGCGTGCTG GGAGGCGGTC TCGCACGTCG GGCGCAACCC GCTCGCGCTG 
CGCGCGTCGC AGCAGCAGGA CGTGACGGCG CGCATCGTCG AGCAGTTGCT GCTCGCGATC 
GACAAGGACG ACGCGCTCGA TCGCCAGCGG CTCGAGAGCC TGCGCTCGGT CGTGCTGCGC 
TCGCGCTTCG TCGCGGCGGG GCGCGCCACG CCCACCGCGC TGGTGCGCGC GACACAGGTG 
GAGATCGACA TCGCCGAATC GCTGCACGCC GATCGCGGCG GCTGGCTGTT CGGGCGGCTG 
CTCGCGCAGG CGCTCGCGGA GGCCGCCACG CTCAACGACG GCATCGAGAT CGTGGTGCGC 
CTGGACGGCG AAGCGGCGAG CACGCACACG AACGTCGCCA CGCGAGACGG GAGGCTCGCA 
TGA 

 

Protein sequence

MNFLDHYNDE LRQLRDAGAR FSKEHPQVAS ALGLHPDAVT DPFVERLLEG VAYLSARVQK 
RLDRECAEFA QQALGRICPL YTASTPAIST FAFHPDLGSP DAFRGNTLPR GSLIAAHLPG 
RKLPVMFSTA REVTLLPLRL ASVECSRSIT GLPSLLAQRL ASSHAVLRFR FEIEGGASIA 
ELAREDDGFK PLHLSVAGDL PRAYALHRAL LADTTAWYAL VSTNRGDEVL PLPMSGIRLS 
GVDDEEALLP EAFGGLPGLR LLREYFAQPT RLLGVYVDAL AAIAAKAPSA RAFDLFFALR 
DAPGDLVGDV DASQFRLFAT PAINLYSKRF DPVPYDANQP EQWIPVDRMR PAAHHLWALT 
EVFVCETNGR AHRARSVLET AGYEGHEGSI RYGMRREDAL LVDGVRRDRF DPLASHDLIA 
VSMVDDTLEP DDVATITGRA LVADRDWRPS ALLDAELQLL DPTAVKRIEC LWPASAPRGK 
PSIDACWEAV SHVGRNPLAL RASQQQDVTA RIVEQLLLAI DKDDALDRQR LESLRSVVLR 
SRFVAAGRAT PTALVRATQV EIDIAESLHA DRGGWLFGRL LAQALAEAAT LNDGIEIVVR 
LDGEAASTHT NVATRDGRLA