| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0738 |
|---|
| Symbol | |
|---|
| ID | 4677172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 746595 |
|---|
| End bp | 747665 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639843262 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_990343 |
|---|
| Protein GI | 121598008 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA TCCGCTCGGC GGTGCCGCCG CCGCCGCTGC CCGAAGTCGT CGAGGGGCAG
CGTTACGCGA CGCCGCAGCG CGGCGTCACG CTGGCCGACA CGATGTTCGT CGATTGCCAC
TTCGAGCGCG TCGAATGGAC CGGCTGCCGG CTCGCGAACC TGCGCTTCGT GAACTGCACG
TTCGACGCGA ACCGCTTCGA TCGCTGCGAG CTCGAGAAGC TCTCGTACGA TTCGAGCCGG
ATTCGCGCGG GCGCGTGGAC GCAGAGCGCG CTGCAGCGCG TGTCGTTCAA CGAATGCGAG
CTCGACGGCG GCACGTGGAC GGGCAGCCTG GTGAAAGACG TCGTATGCAC GCAGTCGAAG
GGCGGCGCGT GGACGTTCGA CGCGGTGCGC GGCGCGCACG TGTCGCTCGT CGCGGGCGAT
TACGCGGGCG TCACGCTGCG CGGCGGCCGC TGGAGCGATA CGTCGTGGAT CGGCAGCCGG
CTCGCCGACC TGCGGCTCGA ATCGGTCGAG CTCGAGAACC TGATCGCCGG GCAAAGCGGC
TTCGAGCGCG TGGTGCTCGT CGAGTGCCGC GGCGTGAACG TGCGCTGGAT CGATTCGCGG
ATCGAGCGGA TGACCGTGCA CGGCTGCGAG CTGAAGCAGG CGGCGTGGTC GCACAGCACA
TGGGCGACGG GCGAGATTCA CGCGAGCCGG CTGCCGATCG CGAGCTTCGA TCATGCGAGC
GTCAACGGGC TGACGGTGAC GAACAGCGAA TTGCCGCAGG CGATCTTCGA TAGCGCGAGC
GTCGCGGACA GCGCGCTGCA AGGCGTGCGC GCGCCGCGCA TCGCATTGCG CGACGCATGG
CTCACGCGCG TGAACCTGTC GGGCGCGCAG ATGCAGCAGC TCGATGCGCG CGGCGTGCAT
CTGGAGCGCG TCGACCTGCG CGGCGCCGAT TGCCGCGGCG GCAACCTGAT CGGCCAACTG
AGCCACACGT GGGCGGCGGC CGATACGCGG GACGCGATTT TCGAAGAAGC CACGAGCGCC
GACGACCGGC TCTGGTGGCA GCGAGTTCAA CCCGGAGCAA GAGGAGTTTG A
|
|---|
| Protein sequence | MSKIRSAVPP PPLPEVVEGQ RYATPQRGVT LADTMFVDCH FERVEWTGCR LANLRFVNCT
FDANRFDRCE LEKLSYDSSR IRAGAWTQSA LQRVSFNECE LDGGTWTGSL VKDVVCTQSK
GGAWTFDAVR GAHVSLVAGD YAGVTLRGGR WSDTSWIGSR LADLRLESVE LENLIAGQSG
FERVVLVECR GVNVRWIDSR IERMTVHGCE LKQAAWSHST WATGEIHASR LPIASFDHAS
VNGLTVTNSE LPQAIFDSAS VADSALQGVR APRIALRDAW LTRVNLSGAQ MQQLDARGVH
LERVDLRGAD CRGGNLIGQL SHTWAAADTR DAIFEEATSA DDRLWWQRVQ PGARGV
|
|---|
| |