| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0696 |
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| Symbol | |
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| ID | 4677832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | - |
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| Start bp | 700042 |
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| End bp | 700908 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639843220 |
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| Product | quaternary amine ABC transporter periplasmic substrate-binding protein |
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| Protein accession | YP_990301 |
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| Protein GI | 121597292 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.320892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCAAG CGATGAAACG ATACGAATCC ATTGCGCGGC GGCTCGCGCG CCGCGCGGCA
GCCGCATCGC CGGCGTTCGC GGCGTTGGCA TGGTGCGCCG CGGCGGCCGC CGCCACGACC
ACGGCAGCCG CGGCGGAGCC GGCCGCCTGT CGCGACGTGC GGATGGCCGG CCCCGGCTGG
ACCGATATCG AAGCGACGAA CGCGCTCGCG GGCGTCGTGC TGAAGGCGCT CGGTTACCGG
CAGAGCGTGT CGAACCTGTC GGTGCCGATC ACGTATCAAG GTCTGAAGAA AGGGCAGCTC
GACGTGTTCC TCGGCAACTG GATGCCGGCG CAGGCGCCGC TCGTCAAGCC GTTCGTCGAC
GCGCGCGCGA TCGACGTGCT CCACGCGAAC CTGAGCCATG CGAAATTCAC GCTCGCGGTG
CCGGACTACG TGGCGGCGGC GGGCGTGCAT TCGTTCGCCG ACCTCGCGAA GTACGCGCAG
CGCTTCGGCG CGAAGATCTA CGGCATCGAG CCGGGCGCGC CGGCCAATCA GAACATCTCG
CGCATGCTCG CCGACAAGGC GCTCGGGCCG GCGAACTGGC AGCTCGTCGA ATCGAGCGAG
ACCGGGATGC TGACGCAGGT CGAGCGCGCG GATTTCGCGA GCCAGTGCGC GAATCTCGCG
CGGCTGTTCC GACAAATGAC GTTCACCGTC GATCTGGAGA ACGGAATGAT CGCCGCGATG
CTGCAGGGCA AGCGCTCCGC CGTGGATGCC GCGCAACACG CGCTGCGTGC GAACCCGTCG
CTCGTCGAAG CATGGCTCGA CGGCGTGCGC ACCGCGAGCG GCGCGCCAGG CTTGCCTGCG
GTGCGCGCGG CGCTCGATGC GCAATGA
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| Protein sequence | MEQAMKRYES IARRLARRAA AASPAFAALA WCAAAAAATT TAAAAEPAAC RDVRMAGPGW
TDIEATNALA GVVLKALGYR QSVSNLSVPI TYQGLKKGQL DVFLGNWMPA QAPLVKPFVD
ARAIDVLHAN LSHAKFTLAV PDYVAAAGVH SFADLAKYAQ RFGAKIYGIE PGAPANQNIS
RMLADKALGP ANWQLVESSE TGMLTQVERA DFASQCANLA RLFRQMTFTV DLENGMIAAM
LQGKRSAVDA AQHALRANPS LVEAWLDGVR TASGAPGLPA VRAALDAQ
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