| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0669 |
|---|
| Symbol | |
|---|
| ID | 4678436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 675379 |
|---|
| End bp | 676002 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639843194 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_990275 |
|---|
| Protein GI | 121596485 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCA AGGCAGTCGT ATTCGATTTC GGCGGCGTGC TGATCGACTG GAGCCCCGAG
TATCTGTACC GGAAACTGAT TCCCGATGAA GCCGAGCGGC GCTGGTTTCT CACGCACGTA
TGCGGAATGG ACTGGGTGGT GAGGCAGGAC GGCGGCCAGA CGATCGAGGA GGGGACCGCC
GAGCGTATCG CGCTGTTTCC CGAGCATGAG GCGCTGATCC GCGCGTTCTA CGCGCGGTGG
CACGAGATGA TCGGCGGCGA GCTCGCGGAC GGCGCCGCGC TCGTCGACGC GCTCGATGCG
CGCGGTGTGC CGCTCTTCGG GCTCACGAAC TGGTCCGCGC AGACGTTTCC GTATGCGTGG
GAGAACTTCC CCGTGCTGCG GCGTTTCAGG GACATCGTCG TGTCCGGCCG CGTGAAGCTC
GCGAAGCCCG ATCCGGCGAT CTACCGCGAG ATGCACGCGC GGATCGAACC GCATCTGCCG
GGCATCGCGC CGCACGAGCT CGTTTTCATC GACGACAACG CGAAGAACGC GGCGGCCGCG
GCCGCGCTCG GCTGGCACGG GATTCATCAC ACGAGCGCCG CGGCGACGCG GGCGCGGCTG
CGCGAGCTGG GCGCGCTTGG CTGA
|
|---|
| Protein sequence | MTVKAVVFDF GGVLIDWSPE YLYRKLIPDE AERRWFLTHV CGMDWVVRQD GGQTIEEGTA
ERIALFPEHE ALIRAFYARW HEMIGGELAD GAALVDALDA RGVPLFGLTN WSAQTFPYAW
ENFPVLRRFR DIVVSGRVKL AKPDPAIYRE MHARIEPHLP GIAPHELVFI DDNAKNAAAA
AALGWHGIHH TSAAATRARL RELGALG
|
|---|
| |