Gene BMASAVP1_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_0643 
Symbolgph-2 
ID4676815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008784 
Strand
Start bp652649 
End bp653377 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID639843168 
Productphosphoglycolate phosphatase 
Protein accessionYP_990249 
Protein GI121596760 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGT CGCCTCTCAA TGGCGCGCCG CGCATCGAAG CGGCGCTCAT CGATCTCGAC 
GGCACGATGG TCGATACCGC AGACGATTTC ACGGCCGGCC TGAACGCGAT GCTCGCGCAG
CTCGATGCCG AGGAGACGAC GCGCGAGGAA GTGATGCGCT ATGTCGGCAA GGGTTCGGAG
AACCTGATCC AGTGCGTGCT GACGCCGCGC TTTTCCGCAG ACGACGCGAA CGCGCGCTTC
GACGAGGCGC TCGCGCTCTA TCAGGCCGAA TACGCGAAGA TCAACGGCCG CCACACGCGG
CTCTACCCGG ACGTCGACGC AGGCTTGCGG GCGATGCGTG AAGCGGGCGT CAAGCTCGCA
TGCGTGACGA ACAAGCCGTG CCGGTTCGCG GTCGAGCTGC TCGCGCAGTA CGGCCTGTCC
GGCCATTTCT CCGCGGTGTT CGGCGGCGAC AGCGTGCCGC GCAAGAAGCC CGATCCGGCG
CCGATGCTCG CCGCATGCGC CGCGCTCGGC GTCGCGCCGC GCACGGCGGT CGCGATCGGC
GATTCGGAGA ACGACGCGCT CGCGGGCCGC GCGGCCGGGA TGGCGACACT GACGGTGCCG
TACGGCTACA ACCACGGCAA CGCTATACAA ACGATCGAAT CGGATGGTAT AGTCGATTCG
CTTCTCGCCG CCGCACGGCT CATCGCCGCG CACAATTCGG CAGGATCAGC GGCAAGATCA
GCCATCTGA
 
Protein sequence
MTTSPLNGAP RIEAALIDLD GTMVDTADDF TAGLNAMLAQ LDAEETTREE VMRYVGKGSE 
NLIQCVLTPR FSADDANARF DEALALYQAE YAKINGRHTR LYPDVDAGLR AMREAGVKLA
CVTNKPCRFA VELLAQYGLS GHFSAVFGGD SVPRKKPDPA PMLAACAALG VAPRTAVAIG
DSENDALAGR AAGMATLTVP YGYNHGNAIQ TIESDGIVDS LLAAARLIAA HNSAGSAARS
AI