Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0623 |
Symbol | |
ID | 4678181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | + |
Start bp | 636629 |
End bp | 638053 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639843147 |
Product | hypothetical protein |
Protein accession | YP_990230 |
Protein GI | 121596930 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00190293 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCTC GACGTCCGGC GTTCGGCCTG ATTGCGTCGC ACGCGTCACG CCGCCGGGCC GTCGAATCCG TGCGCGCCCA CTTTCCGTTC ATGTTCACCC TCTGTCTTGC GATGAAACAC ACTTCGAACC ACTCCGACCC TTCCGGTGCG CCGTCGTCAG CGCGACGCGC CGCATCCGAT TCGTCCCGCC TCGTCCGCGG CATGCGCTCG CCCCAACGCG GCGGCGCGGC ACTGGCGCTG GCCGTCGCCT CGCTCGCCGG ATGCGGGGGC GGCGATTCGG GCGAACCCGC TCCACGCGAA TTCGCGCCCC CGACAGTGCA ACTCGCCTAC CCGACGCAAC CGAACTCGCC CGTCGCACCA GCGCCCACCG CGCACGTATC GAGCGGACAC ACGCCTCCGG CCACGGCGCC CGCCGCGATG CCCACCGCTT CACCCACCGC GACGCCTACC GCTTCACCCA CCGCGACGGC TGCCGCTTCG CCCTCCGCGC CATCCACTGC GACGCCCAAC GCCCCGCCCG CCGCTCCGCC GGCCGTCGTC GCCACCCGCG TCCCGCCGAC GCACGCGGCG TTGCGCCGCC CGACGATCGA ACTCGAATTC GATCGCGCGA TCGAGCCGGG TTCAGTCCCA CACATCGTGC TGCGCGCCGA CGATGGCACG AGCGTCGCCG TCGGCCCGTT GTCGTGGCTG AGCGATCGCC GGATCGCGTT CGCGCCGCGC AAACCGCTCA AGTCGAACAG CCGCTACGAA ATCATGGTGC CCGCCGGCAT CAGGAGCACC ACGGGCGAAC GGTCGGCCCA TCCGCTAACG AGCAGCTTCG ATACCGCGCC CGTTACGCCG CCGCGCGGCC TGCCCAATCT CGACGGCGCC TCGTGCTTCA TCAACACGGC GCTGCAATTG GCGGTTCACT CGTCGGCGCT CGACGACATT CTGTCGAACG AAGCCGTCCC GCCCGCCGTC CGCACGCTGC TCGAAGACTA CGACGCCGCA TCGGCTGATG CACTCGACGC GCAGTTGGCC GCCGCGGTCG CCGCGCTGCG CGCCACGCCG GAGGTCCCGG ACAGCGGGCC GGGACAAACG CTGGAAGTGA TGCAAGCGTT GCGGATGCCG TTATATGACA CGAGCAGCGC GAACAACGCA ACGAACAACG CCGACGCCAT ACGTCATGCG CCGCCCAACA CCAAGGCGTT CTTTCTGAAC TCCTATCCAC CGCTTTCCTA CGCGGATCTG CCGAACCACG ACCGGCTCGT CGCGTTCGAC TACAGCACGG GCGGTCACTA TGTCGCTTAT GTGAAGCGGG ATGGAATCTG GTATCGAATC GACGATGCCC AGGTCAGCGC CGTCAACGAA CAGGACTTGC TTGCCCTGCC GGCGTTCAAC CCCGCTAACG GCAGCGTGTC GATCGAAATC GCGATCTATC GATGA
|
Protein sequence | MNARRPAFGL IASHASRRRA VESVRAHFPF MFTLCLAMKH TSNHSDPSGA PSSARRAASD SSRLVRGMRS PQRGGAALAL AVASLAGCGG GDSGEPAPRE FAPPTVQLAY PTQPNSPVAP APTAHVSSGH TPPATAPAAM PTASPTATPT ASPTATAAAS PSAPSTATPN APPAAPPAVV ATRVPPTHAA LRRPTIELEF DRAIEPGSVP HIVLRADDGT SVAVGPLSWL SDRRIAFAPR KPLKSNSRYE IMVPAGIRST TGERSAHPLT SSFDTAPVTP PRGLPNLDGA SCFINTALQL AVHSSALDDI LSNEAVPPAV RTLLEDYDAA SADALDAQLA AAVAALRATP EVPDSGPGQT LEVMQALRMP LYDTSSANNA TNNADAIRHA PPNTKAFFLN SYPPLSYADL PNHDRLVAFD YSTGGHYVAY VKRDGIWYRI DDAQVSAVNE QDLLALPAFN PANGSVSIEI AIYR
|
| |