| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0608 |
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| Symbol | |
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| ID | 4678280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 615324 |
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| End bp | 617066 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639843133 |
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| Product | hypothetical protein |
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| Protein accession | YP_990216 |
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| Protein GI | 121597273 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.301701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCA CCACGCCCAA TCGCTATTAC GAGGACGAGC TCGTTCGCCT GCGCGAGCTC
GCCGCCGAGT TCGCCCGCGC GCACCCGCTG CTCGCGCCGA TGCTCGGCGC GCCGTCGGGC
GACCCGGACG TCGAGCGGCT GCTCGAAGGC GTCGCGTTCC TGACGGGGCT CGCGCGGCAA
AAGCTCGACG AAGGCCTGCC GGAGCTCGTG CAGGCGCTCG CGAACCTGCT GTTTCCGCAC
TCGCTGCGCC CGGTGCCGGC GGCCACGCTG ATCGCGTTCG AGCCGCGCGG CGCGCTGCGC
GAGCGCGCGG TGATCGCGGC CGGCACCGAG ATCGAATCGG TGCCCGTCGA CGGCACCGCC
TGCCGGTTTC GCACGTGCGG CGAGCTCGAC ATCGAGCCGA TCGCGCTCGC CGGCTGCCGG
TTCGTGCCGC CCGCGCACGG CGGGCCCGCG CTGCGGCTCG ACTTCGAGAT GCTCGGCCTC
GACGCGAGCG AATGGGACGC AACGCGCATT CGGCTGTTCA TCGGCGGCGA GCGGCTGCAC
GCAAGCCGCC TGTTCGCGCT GCTGATGCAG CACGTCGTAG CGGTCGAGAT CGCGGGCGGC
CCGCCCGAGC TGCCCGGCCC GCGCTGCGCG CTCGGCGCCC GCGCGCTGCG CCCGGCGGGC
TTCGACGACG CGCTGTTGCC CTGCCCCGAG CGGGCGTTCC CCGGCTTCCG GCTGCTGCAC
GAATATTTCG CGTTCGCCGA GAAATTCCTG TTCGTCGAGC TGGGCGGCCT CGAGCGCTGG
CGCGCGGCGC GCGCTGGCGC GCAGTTCAGC GTATGGCTCG CGCTCGACAG CGCGCCCGAC
TGGCTGCCCG GCATCGATCG CGACAGCTTC CGGCTGAACG TCGCCGCCGC GCTGAACCTG
TTCGCGCACG AAGCGGTGCC GATCCAGCAC GAGCATCGCG CGACCGATTA CCGGCTGCAG
CCCGAAGGCG ACACGTCGGG CCACTACCGG ATCTACTCGG TCGACCGCGT GATCGGTTAC
CGCCCCGGCC ACGCGGTCGA CCGCCATTAC GTGCCGTTCG GCGTCGCGGG CGACGACGCG
AACGCCGCGA GCTACCGGCT GATTCGCCGC GCCGCGCTCG ACGGCCACGG GCAGGATCTC
CATCTGGCGC TCGCCTACCC GCCCGGCGAG GCGCTCGCCA CGGAAACGCT GTCGATCGGC
CTGTCGTGCA CGAACGGCGC GTTGCCCGCG CGCCTGAAGA TCGGCGACGT GTGCCGCGCG
ACCGACAGCT CGCCCGAGCG CTTCACGTTC GCCAACATCG CGCCCGTGAG CCCGCCGCTC
GATCCGCCGC TCGGCGAACC GCTGCTGTGG CGCACCATCA GCCATCTCGC GCTGAACTTC
CTGTCGCTCG GCGACGCCGA TCATCTGAAG CGCATGCTCG CGCTCCACGC GTTCGGCGAA
CGCGGCGACG ACGCGCGCGC GCAAGCCGAC CGCCGCCGCA TCGACGGCAT CGAATCGGTC
GACGTGCGGG CCGAGACGCG GATCATCGGC GAGCGGATGC TGAGCGGCCA GCGCGTGGCG
CTGCGCTGCA GCGCCCATGC GTTCGGCGGC GCGGGCGAGC TGTATCTGTT CGGCTGCGTG
CTCGAGCGCT TTCTGGCCGA ATACGCGGCG ATCAACACCT ACACGCGCGT CGAGATCGAC
GCGTCGCCCG ACGGCGTGCG CTTCGCGTGG CCGCCGCGAA TGGGGGCGCA ATGCCTGCTC
TAG
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| Protein sequence | MATTTPNRYY EDELVRLREL AAEFARAHPL LAPMLGAPSG DPDVERLLEG VAFLTGLARQ
KLDEGLPELV QALANLLFPH SLRPVPAATL IAFEPRGALR ERAVIAAGTE IESVPVDGTA
CRFRTCGELD IEPIALAGCR FVPPAHGGPA LRLDFEMLGL DASEWDATRI RLFIGGERLH
ASRLFALLMQ HVVAVEIAGG PPELPGPRCA LGARALRPAG FDDALLPCPE RAFPGFRLLH
EYFAFAEKFL FVELGGLERW RAARAGAQFS VWLALDSAPD WLPGIDRDSF RLNVAAALNL
FAHEAVPIQH EHRATDYRLQ PEGDTSGHYR IYSVDRVIGY RPGHAVDRHY VPFGVAGDDA
NAASYRLIRR AALDGHGQDL HLALAYPPGE ALATETLSIG LSCTNGALPA RLKIGDVCRA
TDSSPERFTF ANIAPVSPPL DPPLGEPLLW RTISHLALNF LSLGDADHLK RMLALHAFGE
RGDDARAQAD RRRIDGIESV DVRAETRIIG ERMLSGQRVA LRCSAHAFGG AGELYLFGCV
LERFLAEYAA INTYTRVEID ASPDGVRFAW PPRMGAQCLL
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