Gene BMASAVP1_0607 details

Gene Information

• Locus tag: BMASAVP1_0607
• ID: 4677475
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 614826
• End bp: 615287
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639843132
• Product: hypothetical protein
• Protein accession: YP_990215
• Protein GI: 121598024
• COG category: [S] Function unknown
• COG ID: [COG3518] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03357] type VI secretion system lysozyme-related protein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGATC GCGAATCGTC GCGGGCCGGC GAGCCGCGCA CGCTCGAGCG CCGGCTGCTC 
GAGCGGATCG CGAACCGGGA AGCGGGCGGC GAGCACGATC GCCCGCCGCC CGCCGACGTG 
CTCGCGCACT CGATCATCGA CCACCTGCGC CGCATCCTGA ACACGCGGCA GGGCCACGTG 
CCGATCGATC CCGCCTTCGG CGTGCCGGAT TTCACGAATC TCGCGGGCGG CTTCGCGCAA 
GGCTCCGCCC GCGAAATCGA AGCGCAGATC GAGCGCGTGA TCACTTGCTA CGAGCCGCGG 
CTGAAAGCGC CGCGCGTCTC GCTCGCCGAG CGCGGGCCCG ATGCGGCGAC GCTGCGCTTC 
AGCCTCGATG CGCGGCTCGT GATCGACGCG CACGACGTGC CGGCGCGCTT TCTGACGACC 
GTCACCGGCA ACGGAAAGAT CGATATCCGA ACGATTTCCT GA 

 

Protein sequence

MADRESSRAG EPRTLERRLL ERIANREAGG EHDRPPPADV LAHSIIDHLR RILNTRQGHV 
PIDPAFGVPD FTNLAGGFAQ GSAREIEAQI ERVITCYEPR LKAPRVSLAE RGPDAATLRF 
SLDARLVIDA HDVPARFLTT VTGNGKIDIR TIS