Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0457 |
Symbol | |
ID | 4677023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | - |
Start bp | 465262 |
End bp | 466857 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639842984 |
Product | NodT family efflux transporter outer membrane lipoprotein |
Protein accession | YP_990067 |
Protein GI | 121596855 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.555102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAGA CCGCAACGCA CGCAGCCACA CGCACGACGA CCCTGCCGGT CCGCCGCCCC GCGCGCCGGC TCGCGGCGCT CGCGCTCGCC TGGGCGCTCG CCGGCTGCGT GCCGTCGGGC CTGAAGCCGA CGCTCGCGCC GCGCACGCCC GGCGACGACG CGCTCGCGCA CACCACCGGC GGCGCGACGC ACGGCGCATG GCCGAGCCCG GACTGGGTGC GCCAGCTCGG CGATCCGCAG CTCGACGCGC TCGTCGACGA AGCGCTGCGG CAGAACCCGA CGCTGCAGGC CGCGCAGGCG CGCATCGGCG TCGCGCAGTC GCAGCTGCAG CAGTTCGAAT CGCTGACGGG GCTCACCGCG ACGGCGGGCG CCTCGCTCTC CAAGGCGCAC GTGCCGCGCT CGGGCGGCAC CCTCAATACG ACGCTGAACG GCTTGCCGGT GTCGGTGCCG CTCGTGGGCG AATCGGTGGT GTCGTCGTCG TCGCTGTTCG TCGGGCTGAA CTATCAGCTG GACCTGTGGG GCAAGAACGC GGCGGCCACG CGCGGGCTGC TGTCGATGCG CGATGCGGCG CGCGTGGAGG CCGAGCAGGC GCGGCTCACG CTGTCGGTGG CGATCGTGAC GCTGTACGGC GAGCTGGACC GCGCGTATGC GCTGCGCGAG CTGCTGCAAC AGAAGCGCCG CGCGAGCGAG CAGGTCGAGG CGGTGCTGCG CGAGCGCGCG GCGCGCGGGA TCGACAACGG CTACGACGCG GACGACGCGG CGCTCAAGCG CGGCAAGCTG CTCGAGCAGA TCGCGCTGAC CGACGAGCAG ATCCAGTTGC AGAGGCTGCA GCTGGGCGTG CTGAGCGGAC GGGGGCCGGA GCGCGGGCTG TCGCTCGCGC GGCCGAAGCT CGCGCCGCTC GCGGACGCGC CGCTGCCCGC GCGGCTGCCC GCGCGGCTGC CGGCCGGGCT GCTGGGGCGG CGGCCGGACA TCGTCGCGGC GCGATTGCGG GTGGAGGCGG CGTACGCGGC GATCGACGGC ACGCGCGCGT CGTTCTACCC GGACGTGAAC CTGGCGGCGC TGGGCGGGCT GTTCGCGCTC ACGCCGGCGT CGCTGTTCAG GCACGATGCG CTGGGCGGCT CGATCGGGCC GGCGCTGTCG CTGCCGATCT TCGATCGCAG CCGGCTGAAG GCGAAGCTGG GCGGCGACGT GGCGAACGCG GACATGGCGC TCGCGCTGTA CAACCAGACG GTGGATGCGG CGCTGGGCGA GGTGGCGCGG CAGTTGACGT CGCTGGCGAC GCTCGACACG CTGCTGAAGG CGCAGCAGCA GGCGCTGCGC GCGGCGCAGC GGATGGTGGC GCTGGCGCAG GACCGGCATC GCCGGGGGAT GGGGATGCGC AAGGACATCG ACGTGGCGCA GCTCACGCTG CTGGACGAGC GCGCGCACGT GGTGGAGCTG CAGGCGCGGC GGCGCACGCT GCGGGTGGGG CTGATCGGCG CGCTGGGCGG CGGCTTCGAC GCGCGGCCGG CGAGCGGCGC GCCGCCCGCG CAGGCGGGCC AGCCGTTCGC GGCGGCGTCG CGGCCGGTGG CGGCGCACGA TGCGCAACCT GATTGA
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Protein sequence | MTQTATHAAT RTTTLPVRRP ARRLAALALA WALAGCVPSG LKPTLAPRTP GDDALAHTTG GATHGAWPSP DWVRQLGDPQ LDALVDEALR QNPTLQAAQA RIGVAQSQLQ QFESLTGLTA TAGASLSKAH VPRSGGTLNT TLNGLPVSVP LVGESVVSSS SLFVGLNYQL DLWGKNAAAT RGLLSMRDAA RVEAEQARLT LSVAIVTLYG ELDRAYALRE LLQQKRRASE QVEAVLRERA ARGIDNGYDA DDAALKRGKL LEQIALTDEQ IQLQRLQLGV LSGRGPERGL SLARPKLAPL ADAPLPARLP ARLPAGLLGR RPDIVAARLR VEAAYAAIDG TRASFYPDVN LAALGGLFAL TPASLFRHDA LGGSIGPALS LPIFDRSRLK AKLGGDVANA DMALALYNQT VDAALGEVAR QLTSLATLDT LLKAQQQALR AAQRMVALAQ DRHRRGMGMR KDIDVAQLTL LDERAHVVEL QARRRTLRVG LIGALGGGFD ARPASGAPPA QAGQPFAAAS RPVAAHDAQP D
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