Gene BMASAVP1_0448 details

Gene Information

• Locus tag: BMASAVP1_0448
• ID: 4678198
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: -
• Start bp: 455539
• End bp: 457521
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 639842975
• Product: putative cysteine desulfurase
• Protein accession: YP_990058
• Protein GI: 121596706
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0520] Selenocysteine lyase
• TIGRFAM ID: [TIGR01979] cysteine desulfurases, SufS subfamily

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCCG CACCCGTCGC GCTGCCGGAC GCGGCGCCGC CCGCCGGGCT GCCCGATCCG 
GCGACGCTTG CGCGCCTTGC GTCGGAGTTT CTCGCCGCGC TGCCCGGGCA GCCCGCCGCG 
CCGAATGCCG GCGCGGGCAG CGGCGCCGTC GGCGGTGTGC CGTCGGCGTT GCCGGCCGCC 
GCGCCGATGC TTGCGTCGGT TTCGAATCCC GCGCCGCCGG GCTCGCCGCT TGCCGGGCCC 
GGCGGCACCG GCACGGGCGT GCCGGGTATC GGGGTGCCGC CGGGCAAGGT GCCCGGCGCG 
AACCTCGTAC CCGCGCCGAC ACATGTGCTG TCGCTCGGCA ACCGCACGCC CGCGCTCGTT 
GGGCACGCGG CCGCGCAAAA CGGATGGCCG GACAGCGCGG TTGCAATCGC GCCGGCGCTC 
GAGCCGCGCG CGGGCGGCGT CGCGCTCGGC GTGCCGCCCG TGCCGGAACC CGATGCCGTC 
CGTCGCGCGG GCGATGCGTC CGCGGCGGCG GCGCCTTCGC CTTGGTCGTA TTACTTTGTC 
GAGCCCGCCT CGGATGATTG GTGGCGCGAC GCCGCGCGCA CGCCGATCGA CGTGCCGCGC 
GACGGCGTCG CGTCGCCGCG CGCGTTCGGC CTGCCCGACG AAAACGCGTG GCGCGATCTG 
CTGTCGATCG GACGGCCGGC CGCCGATCGG CATCGCGCGT CGCGCTATTT CGTCGACGAC 
GCGCAGCCCA CGAATGCGCA TGCGCCTGGC GCCGGCGCGC ATCCGCCGTT CGACGTCGCC 
GCGATTCGCC GCGATTTCCC GATACTCGCC GAGCGGGTGA ACGGCAAGCC GCTCGTCTGG 
TTCGACAACG CGGCGACGAC GCACAAGCCG CAGGCGGTGA TCGATCGTCT CGCGCACTTC 
TATGCACACG AGAATTCGAA CATCCATCGC GCGGCGCATG CGCTCGCCGC GCGCGCGACC 
GACGCGTACG AGCACGCGCG CGCGACCGTG CAGCGCTTCA TCGGCGCGGC GTCGCCGGAC 
GAGATCGTGT TCGTGCGCGG CGCGACGGAG GCGATCAATC TGATCGCGAA AACATGGGGT 
GTCGGCAACG TCGGGGAAGG CGACGAGATC GTCGTGTCGC ATCTCGAGCA TCACGCGAAC 
ATCGTGCCGT GGCAGCAGCT CGCCGCGTCG GTGGGCGCCG TGCTGCGCGT GATTCCCGTC 
GACGATGCCG GCCAGGTCTT GCTCGGCGAA TACCGGAAGC TGCTCAACGA TCGCACGAAG 
ATCGTCTCCG TCACGCAGGT ATCGAACGCG CTCGGCACGG TCGTGCCGGT GAAGGAGATC 
GTCGAGCTCG CGCATCGCGC GGGCGCGAAG GTGCTCGTCG ACGGCGCACA GTCGATTTCG 
CACATGCGCG TCGACGTGCG GGCGCTCGAC GCCGATTTCT TCGTGTTCTC CGGCCACAAG 
ATCTACGGCC CGACGGGAAT CGGCGTCGTC TATGGCAAGC GCGCGCTGCT CGACGGCATG 
CCGCCGTGGC AAGGCGGCGG CAACATGATC GCGGACGTGA CGTTCGAGCG CACCGTATTC 
CAGCCGCCGC CGAACCGTTT CGAGGCGGGA ACGGGCAACA TCGCCGATGC GGTCGGGCTC 
GGTGCGGCGC TCGATTACGT GGCGCGGATC GGCATCGAGC GGATCGCGCG CTACGAGCAC 
GATCTGCTCG CCTATGCGGC GGGCGTGCTC GCGCCGGTGC CGGGTGTGCG GCTGATCGGC 
ACCGCGCGCG ATAAGGCGAG TGTGCTGTCG TTCGTGCTGA AGGGCTATGA GACGGAAGAA 
GTCGGGCGAG CGCTGAATGC GGCCGGCATC GCCGTGCGGT CCGGGCACCA CTGCGCGCAG 
CCGATTCTGC GCCGCTTCGG GCTCGAAGCG ACCGTGCGTG CGTCGCTCGC GTTCTACAAC 
ACGCGCGACG AGGTCGATGC GATGGTCGAC GTCGTGCGCG AGCTTGCGGC GCGGCGCATC 
TAG 

 

Protein sequence

MSAAPVALPD AAPPAGLPDP ATLARLASEF LAALPGQPAA PNAGAGSGAV GGVPSALPAA 
APMLASVSNP APPGSPLAGP GGTGTGVPGI GVPPGKVPGA NLVPAPTHVL SLGNRTPALV 
GHAAAQNGWP DSAVAIAPAL EPRAGGVALG VPPVPEPDAV RRAGDASAAA APSPWSYYFV 
EPASDDWWRD AARTPIDVPR DGVASPRAFG LPDENAWRDL LSIGRPAADR HRASRYFVDD 
AQPTNAHAPG AGAHPPFDVA AIRRDFPILA ERVNGKPLVW FDNAATTHKP QAVIDRLAHF 
YAHENSNIHR AAHALAARAT DAYEHARATV QRFIGAASPD EIVFVRGATE AINLIAKTWG 
VGNVGEGDEI VVSHLEHHAN IVPWQQLAAS VGAVLRVIPV DDAGQVLLGE YRKLLNDRTK 
IVSVTQVSNA LGTVVPVKEI VELAHRAGAK VLVDGAQSIS HMRVDVRALD ADFFVFSGHK 
IYGPTGIGVV YGKRALLDGM PPWQGGGNMI ADVTFERTVF QPPPNRFEAG TGNIADAVGL 
GAALDYVARI GIERIARYEH DLLAYAAGVL APVPGVRLIG TARDKASVLS FVLKGYETEE 
VGRALNAAGI AVRSGHHCAQ PILRRFGLEA TVRASLAFYN TRDEVDAMVD VVRELAARRI