Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0393 |
Symbol | |
ID | 4677847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | - |
Start bp | 404319 |
End bp | 405683 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639842920 |
Product | Pca operon transcriptional activator PcaQ |
Protein accession | YP_990003 |
Protein GI | 121597010 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR02424] pca operon transcription factor PcaQ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.439238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATAACC GGATCGCCGA CGGCCGGGTC AAGTTCCGGC ACCTGCAGTG CTTTCTCGCC GTTGCGCAGT TCGGCAGCGT GCAGAAGGCC GCGCACAGCC TGTCGATCAC GCAGCCCGCC GTGTCGAAGA CGATCGCCGA GCTCGAATCG ATCCTCGGCG TGCGGCTGTT CGAGCGCGGC CGGCAGGGCG CGCGGCCCAC GCGCGAGGGC CAGCTTTTCA TGCCGCACGC GAGCGCGTGC GTGCTCGCGC TGCGGCAGGG CGTGGGGCTG CTCGCGCGCG AGGGCGGCGG CGCGGCGGCC ACTCTCGAGA TCGGCATGCT GCCGACCGTC GCCGCGTCGC TCGCGCCCGC CGTGCTGAAA ACGCTCGCGG CCGAATGGCC GCGCGCGGTT GTGCGGATCA CGACCGTCGC GAACGCCGAG CTGCTCGAGC GGCTGAAGGC GGGGGCAATC GAATGCGCGA TCGGGCGGCT GTCGGAGCCC GAGCGGATGG TGGGGCTGTC GTTCGAGCAT CTGTACAACG AGCCGCTCGT CGCGGTCGTG CGCGCGGGCC ATCCGCTTGC GGCGAGCGCT TCGCCCGCCG CGCAGCTCGC GCGCTATCCG GTCGTGCTGC CGCCTTACGG CACGATTATC CGGCAAGCGG CCGAGCAATT GTTGAGCGCG TGCGGCGCGC CGCCGCTCGA ATCGTTCGTC GAGGTGCTGT CGGTGTCGGT CGCGCGCGCG CTCGCGCTCG AGAACGACGC GGTGTGGTTC GTGCCGCGCT ACGCGGCCGA ATTCGATCTC GCGGCCGGCA CGCTCACGCG GCTCGCGCTG CCCGTCGACG GCGCGGACGA GCCGGTCGGG CTGATCCTGC GCACCGACGC GCAGCCGTCA CCCGTCGCGC GCGCTGATCG ACGCGGTGCG CGCGATTGCG CGGCGGCGGC TTGCCGGAGC GGGCACGACG AGCGGGCGCG CGCGCGGCGC GCGAGGCGCG ACGGGCAAGG GGCGCGGTCG GCGGGACGCG TGAGGCCGGC GGCCGGCGTT CGCCGCCGTG ACGGCGCGGC GGCGATCGGT TTTGCGGATC GGATCGGACC GGCAAGCGAC CGGGCGTGTA GGGTTCCGGG CGGAGCTCGC GGGCAGGCGT GGAGTGTCCG GGCCGGCGGA TGCCGTCGAT TCGTTGAACG GCAGGAGGCA AGCACGCGGC GACGACGAGT TGGCGTCCGA CGGTTGCGGG CGGAGCTCGC GGGCAGGCGT GGAGCGTCCG GGCCGGCGGA TGCCGTCGAT TCGTTGAACG GCAGGGGGCA AGCACGCGGC GACGTCGAGT CGACGCCCGA CGGTTGCGGG TGGAGTTCGC GGGCAGGCGT GGAGTGTCCG GGCCGGCGGA TGTAG
|
Protein sequence | MHNRIADGRV KFRHLQCFLA VAQFGSVQKA AHSLSITQPA VSKTIAELES ILGVRLFERG RQGARPTREG QLFMPHASAC VLALRQGVGL LAREGGGAAA TLEIGMLPTV AASLAPAVLK TLAAEWPRAV VRITTVANAE LLERLKAGAI ECAIGRLSEP ERMVGLSFEH LYNEPLVAVV RAGHPLAASA SPAAQLARYP VVLPPYGTII RQAAEQLLSA CGAPPLESFV EVLSVSVARA LALENDAVWF VPRYAAEFDL AAGTLTRLAL PVDGADEPVG LILRTDAQPS PVARADRRGA RDCAAAACRS GHDERARARR ARRDGQGARS AGRVRPAAGV RRRDGAAAIG FADRIGPASD RACRVPGGAR GQAWSVRAGG CRRFVERQEA STRRRRVGVR RLRAELAGRR GASGPADAVD SLNGRGQARG DVESTPDGCG WSSRAGVECP GRRM
|
| |