| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0390 |
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| Symbol | |
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| ID | 4677965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | - |
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| Start bp | 401077 |
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| End bp | 402576 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639842917 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_990000 |
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| Protein GI | 121597126 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.817676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCGGAC GGCGAGGACC GTCGCACCGG ATGCCGCTCG GCTATATGGT GATCGCCGGC
GCGGTGGCGG TCGCGATCGT CATGATGTCC ATCTGCGCGG CGATCCTGCG CGACAGCCGC
GACGACGCCT TCGAGCACGC GCAGCGCGCC GCGCGCAACA CGCTGCAGAT GATCGAGCGC
GACGTCACGC GCGGCTTTCG GCTGTACGAC CGCACGCTCG CGCGTATCGC CGCGCAGTTC
GGCGATCGCC GGATCGCGGC GCTGCCCGCC GGTCTGCGCC GCGAGATCCT GTTCGATTCC
GCGGCGGCCG CCAACGAGGC CGGCGTGATG TACGTGCTCG ACGCGAGCGG GCACGTGACG
CTCGCGTCGA CGCGCGGCCC GCTGCCGGCC GAGCGCTTCG CGTCGTACGA TTTTTTCGCC
GCGCAGCGCG ATACGCCGGC GCTCGGCATG TATCTGAGCG GGCCGTACCG GATGTCGTCG
CGCGACGGCG AGCCGTACGT CGCGTTGTCG CGCCGCATCG AGCGCGCGGA CGGCGCGTTT
GCGGGCGTCG TCGTGCTCGC GGTGCGCATC GCGTATTTCC GGCAACTGCT GGCGGCGGCG
AATGTGGGCC CGCACGGCGC GCTCGTGCTG ATGCACACGG ACGGGCGCAT CCTGATGCGG
ATTCCGTTCG ACGAGAAATT CGTCGGCCTC GACCTGACCG GGACGAGCCT CTACTCGCGC
ATGCAGTTCG GCCGTTCCGG CGAGTTCTTC GACGTCGAGC CGATCGATCA CGTGAAGCGC
TTCTATCTGT ATCGCCGGCT CGACGACGTT CCGCTCGTCG TGCAGGTGGC GATCGCCGAC
GACGACATCT ATGCGACCTG GCGTCTGCGC GCGTGGCGCT TCGGCGTGCT GACGGGCGTG
TTCGCGCTGA TCTTCGTCGT GATGAGCGCG TACCTCGCGC ATTCGCTGTG GCGCAAGTCG
ACGGCCGAGG CGGCGCTCGC GCGGCTCGCC GGCACCGACA GCCTCACGGG CCTCTACAAC
CGGCGCGCGC TCGACGAGAC GCTCGAGCGC GAATGGCGGC GCGCGGTGGG CGGCGATCGT
CCGCTCGCGA TCCTGTTCGT CGACATCGAT CACTTCAAGC GCTACAACGA CACGTACGGC
CATCAGGTCG GCGACGAGGT GCTCGCGACG GTGTCGCGCT GCATCGCGCA GCAGGCGGCA
CGGCTCGGCG ACGTCGTCGC GCGCTACGGC GGCGAGGAAT TCGTCGTCGT GCTGCCGGAT
ACGCCGCGCG GCGGCGCGCT CGTCGTCGCC GAGCGCGTGC GGCTCGGCGT GCGGATGCTC
GGCATCGAGC ACGAAGGCTC GGAGGTCGGG TTCGTGACGG TCAGCGTCGG CGTCGCGGTG
TGGCATCCGG ACGGCGCGTC CGCGCCGCAT ATCGCCGCGA TCGTCGAGGC GGCCGATCAG
GCGCTCTATC GGGCGAAGGC GGACGGGCGC AATCGCGTCG TCGACCTCGG GCTCGGCTAA
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| Protein sequence | MRGRRGPSHR MPLGYMVIAG AVAVAIVMMS ICAAILRDSR DDAFEHAQRA ARNTLQMIER
DVTRGFRLYD RTLARIAAQF GDRRIAALPA GLRREILFDS AAAANEAGVM YVLDASGHVT
LASTRGPLPA ERFASYDFFA AQRDTPALGM YLSGPYRMSS RDGEPYVALS RRIERADGAF
AGVVVLAVRI AYFRQLLAAA NVGPHGALVL MHTDGRILMR IPFDEKFVGL DLTGTSLYSR
MQFGRSGEFF DVEPIDHVKR FYLYRRLDDV PLVVQVAIAD DDIYATWRLR AWRFGVLTGV
FALIFVVMSA YLAHSLWRKS TAEAALARLA GTDSLTGLYN RRALDETLER EWRRAVGGDR
PLAILFVDID HFKRYNDTYG HQVGDEVLAT VSRCIAQQAA RLGDVVARYG GEEFVVVLPD
TPRGGALVVA ERVRLGVRML GIEHEGSEVG FVTVSVGVAV WHPDGASAPH IAAIVEAADQ
ALYRAKADGR NRVVDLGLG
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