| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0370 |
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| Symbol | |
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| ID | 4678021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 382151 |
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| End bp | 383491 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639842897 |
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| Product | putative outer membrane protein TolC |
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| Protein accession | YP_989980 |
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| Protein GI | 121597750 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00192444 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCTACG TTACCGTTTG CGCGGTGCTT GCCGCACTCG GCACCGGTTC CGAATCCGCA
CGTGCGTTCT GTCTCGACGA GGCTTATCAG CACGCAATAT CGAACGATCC GAAATTTCTC
CAGGCGCGGG CGGAATACGA CGCCGCGCGG CAGAAGTTTC CGCAGGCGCG CGCGCAGATG
CTGCCGCAGG TGAGCGCGCA GCTCGAATGG GGCCGCTACG GCACGCACGC GAACCTGTTC
GGCATCGACG TGAGCGGCAA CAGCACCGCC GCGTACGGCG CCGCGCAGCT CTCGCAGGCG
CTGTTCAACA TGCCGTATTT GTACGACATG AGCCGCGCGA AGGAATTCGA GGAATCCGCG
CGGCAGCAGC TCGAAGTCGC GAAGCAGGAG CTGATCATGC GCGTCGCGAA CGCGTGCTTC
GATCTGCTGT CCGCACGCGA GAAGCTGCAG CTCGCCGACG ACGAGGTCGG CGCGCTCACG
CGCCTGGAGA GCGATACCCG CCGCATGGCG CAGCTCGGCA TGAAGACCAT CGGCGACACG
GCCGAGATCG AGGCGCGCAG GAGCCTCGCG CAGTCGGACG AGGCGCTCGC GCGCACCGAC
GTCGAGGCGC GGCGCGCCCG CTACGAGACG CTGCTCGGCT CCGCGATCGA CTTCACGCGC
TGGCCGCGGC TCGCGATGCA CGGCACGTCG CCGCGCATTC CGACGGGCGA CTACCAGCCG
CAGGACAACC CGTCGTACCA GCAGGCGTAT CGCGACCTGC GCGTCGCGCG GCTCGCGTCC
AAGCGCATCA ACGCGGAGCA CCTGCCGAGC GTCGACCTGT TCGCGACGTA CTCGCGCGGC
CTCAATCCGA ACCTGCGCGG CCTCACCGAC AAGAACGACT TCCACCAGAG CGCAGTCGGC
GTGCAGGTGA CGATTCCGAT CTTCTCGGGC GGCAGCGTGC ACTACCGGAA GATCGAGGCC
GACCACGTCG CGACGCAGTA CCAGAACCGG CTGCGCGAGG TCGAGCAGCA ACTGAGCACC
GATCATCGCG AGACGCTCGC GGCGCTGCAG TCGATCGGCA CGCGGATCCG CGCGCTGCAG
CAATCGCTGC AGGCGGCGCG GCTCGCGTAC GATTCGTCGA TGAAGGCGCA CCAGGTCGGC
TACAGCACGA CGTACGAGAC GCTGAACCTG CGCACCGACA TCTCGAACAT CCGCCAGAAG
CTGTTCGAGA GCTACCTCGA CGCGCTGAAG CTCCAGCTGA AGCTCAAGGG CATTCTCGGC
ACGCTGGACG AGCAGTCGCT CGTCGCGGTC GACAGCTTCC TCGCGAGCAA CGCGGCGCCC
GCCGATCAGA AGAGCGAATG A
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| Protein sequence | MAYVTVCAVL AALGTGSESA RAFCLDEAYQ HAISNDPKFL QARAEYDAAR QKFPQARAQM
LPQVSAQLEW GRYGTHANLF GIDVSGNSTA AYGAAQLSQA LFNMPYLYDM SRAKEFEESA
RQQLEVAKQE LIMRVANACF DLLSAREKLQ LADDEVGALT RLESDTRRMA QLGMKTIGDT
AEIEARRSLA QSDEALARTD VEARRARYET LLGSAIDFTR WPRLAMHGTS PRIPTGDYQP
QDNPSYQQAY RDLRVARLAS KRINAEHLPS VDLFATYSRG LNPNLRGLTD KNDFHQSAVG
VQVTIPIFSG GSVHYRKIEA DHVATQYQNR LREVEQQLST DHRETLAALQ SIGTRIRALQ
QSLQAARLAY DSSMKAHQVG YSTTYETLNL RTDISNIRQK LFESYLDALK LQLKLKGILG
TLDEQSLVAV DSFLASNAAP ADQKSE
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