Gene BMASAVP1_0337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_0337 
SymbolopcP 
ID4677419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008784 
Strand
Start bp353547 
End bp354677 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content62% 
IMG OID639842865 
Productputative outer membrane porin 
Protein accessionYP_989948 
Protein GI121597058 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGA CTCTGATTGT TGCAGCAGTT GCTGCATCGT TCGCAACCGT CGCGCACGCG 
CAAAGCAGCG TCACGCTGTA CGGTGTGCTC GACGCGGGCA TCACGTACCA AAGCAACGTC
GCGACGCCGT CGGGCTCGGG CAAGTCGCTG TGGTCGGTCG GCGCCGGCGT CGACCAAAGC
CGTTTCGGTC TGCGCGGCTC GGAAGACCTG GGTGGCGGCC TGAAGGCGAT CTTCACGTTG
GAAAGCGGCT TCAACATCGG TAACGGCCGC TTCAACAACG GTGGCGGCAT GTTCAACCGT
CAAGCGTTCG TCGGTCTGTC GAGCAACTAC GGCACCGTCA CGCTGGGCCG TCAGTACGAC
GCAACCCAAG ACTACCTGTC GCCGCTGTCG GCAACGGGCA CCTGGGGCGG CACGTACTTC
GCGCACCCGC TCAACAACGA CCGCCTGAAC ACGAACGGCG ACGTCGCGGT GAACAACACG
GTCAAGTTCA CGAGCGCGAA CTACGCCGGC CTGCAATTCG GCGGCACGTA CTCGTTCTCG
AACAACTCGC AATTCGCGAA CAACCGTGCA TACAGCGCGG GCGCTTCGTA CCAGTTCCAA
GGCCTGAAGG TCGGTGCGGC GTACTCGCAA GCTAACAACG CTGGCGCGAA CACCACGGGC
GCAACGGATC CGCTGACCGG CTTCAACATC GGCGGCACGA ACGCAGCAAG CATCCAAGGC
CGCTCGCGCG TGTACGGCGC CGGTGCAAGC TACGCTTACG GCCCGCTGCA AGGCGGCCTG
CTCTGGACGC AATCGCGTCT CGACAACCTG GCAAACGGCG CGCCGACCAT CCGTGCCGAC
AACTACGAAG CAAACGTGAA GTACAACCTG ACGCCGGCTC TGGGTCTGGG TGTTGCTTAC
ACGTACACGT ACACGAACGC GAAGGCGAAC GGCGAAAGCA CTCACTGGAA CCAAGTTGGC
GTCCAGGCCG ACTACGCGCT GTCGAAGCGC ACCGACGTGT ACGCACAAGC CGTGTACCAG
CGTTCGTCGA AGAACGCGAA TGCGTCGATC TACAACGGCG ACCTCAGCAC GCCGTTCAGC
ACGTCGATCA ACCAAACCGC AGCGACGGTT GGTCTGCGTC ACCGCTTCTA A
 
Protein sequence
MNKTLIVAAV AASFATVAHA QSSVTLYGVL DAGITYQSNV ATPSGSGKSL WSVGAGVDQS 
RFGLRGSEDL GGGLKAIFTL ESGFNIGNGR FNNGGGMFNR QAFVGLSSNY GTVTLGRQYD
ATQDYLSPLS ATGTWGGTYF AHPLNNDRLN TNGDVAVNNT VKFTSANYAG LQFGGTYSFS
NNSQFANNRA YSAGASYQFQ GLKVGAAYSQ ANNAGANTTG ATDPLTGFNI GGTNAASIQG
RSRVYGAGAS YAYGPLQGGL LWTQSRLDNL ANGAPTIRAD NYEANVKYNL TPALGLGVAY
TYTYTNAKAN GESTHWNQVG VQADYALSKR TDVYAQAVYQ RSSKNANASI YNGDLSTPFS
TSINQTAATV GLRHRF