Gene BMASAVP1_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_0288 
Symbol 
ID4677202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008784 
Strand+ 
Start bp310391 
End bp311041 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content73% 
IMG OID639842816 
Producthypothetical protein 
Protein accessionYP_989899 
Protein GI121597835 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0105629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTCCC ATCTGCCCCC GCGCGTGCGC GGCCTCTGGC TTGCGGCCGC GCTCGCCGCG 
CTGCTGTATG GGCTGTCGCT CGGCCACGCG CCCTATTCCG GCCAGCCCGC CGCCAAGGCG 
GCGCTCGGCG TCCTGTTGCT CGCCGCGGCG CTGCGGCATC CGCTCGCGCG CGAGCGCGCT 
TGGCTCGGCG CGGCGCTCGC CGCGTCCACG CTCGGCGACG TGCTCCTCGC GCTCGCCTCG 
TGGCCGCCGT CGTTCGTCGC CGGCCTCGGC GCGTTCCTGC TCGCCCATCT TGCCTATTGC 
GCGCTGTTCG CGCCGTGGCG CGCGGCGCCG CGCGGGGCGC GCGCCGTCGC GCTCGGCGCG 
GTGTGGCTCG CCGCTCCCGC GCTCTACGCG GCGTTCCTTC CTCACCTCGC CGCGCTCGCG 
GCGCCCGTCG CCGTCTATGT TGCCGTGCTC GGCGCGATGG CGAGCTTCGC GCTCTGCGCG 
CGCACGCCGG GGCCGCAGGT CGCGGCCGGC GCGCTCGTGT TCGTTGCGTC CGACGCGCTA 
ATCGGCATCG ATCGTTTTCT CGGCGCGTTT TCCGGCGTCG ATTATTTCAT CTGGTTTCTT 
TATGCGATCG CACAATTGAC GATGGCATTC GGTGTGCTGC GGCGCAAATA A
 
Protein sequence
MLSHLPPRVR GLWLAAALAA LLYGLSLGHA PYSGQPAAKA ALGVLLLAAA LRHPLARERA 
WLGAALAAST LGDVLLALAS WPPSFVAGLG AFLLAHLAYC ALFAPWRAAP RGARAVALGA 
VWLAAPALYA AFLPHLAALA APVAVYVAVL GAMASFALCA RTPGPQVAAG ALVFVASDAL 
IGIDRFLGAF SGVDYFIWFL YAIAQLTMAF GVLRRK