Gene BMASAVP1_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_0258 
Symbol 
ID4677241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008784 
Strand
Start bp286519 
End bp287487 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content73% 
IMG OID639842786 
Productputative peptidoglycan-binding LysM/M23B peptidase 
Protein accessionYP_989869 
Protein GI121597179 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGAG TTGTCTCGAG CATGAGCAAG AGCGAGATCG ACCGCAGTGT CGCATGGTTG 
TCCGGCGTGG CGGCCGCGTT CGTCGTCGCG GGCTGCGCAA CCACGTCGCC CGTCACGCCG
ACTGATACGC TCGCGGCCGC CGCGTCTTCG GCGAGCGCCG CGCAGCCCGC GGCCGCGCCG
CCGGGCGACG CGGCGCAGCA TCCGGAGCAC GCCGCCGCGC CGGCGCCGAT CGCGACACGC
TACGTCGTGA GGCGCGGCGA TACGCTGTCG GCGATCGCGC AAGCGAACGG CTGCACCGTG
CGCGAGCTGC AGGCCTGGAA CCGGATGGGC CGGCGCACCC GGATCGGCAT CGGCCAGGTA
TTGCGGATCG CGCCGCCGGG TGCGGAAAAC GCGGTCGCCT CCGAGGCGGC GGATGGCGCG
GGCGCGACCC GCGCGGCCGG CAATGCAGCC GGCGCCGCGC GCGCGGCCGA TCCGGCGAGC
GGCGCGGGCG GGGCGCTTGT CGCCGATGCG CCGCAGCCTG CATCGGCGCC CGAAAGCGCC
GCGGACCGGG CGGCGGACCA TCGGGTCGTC CAGGAAACGA AGCGGCACGC GCAATCGATC
GCGCTCGCGT GGCCGGCGAA GGGCGCGGTC GTCGAAACGT TCCAGCCCGG CCGCAATCGC
GGCATCCGGA TCGTCGGGCG CGCGGGCGAT CCGGTGCGTG CCGCGGCGTC CGGCCGGGTG
ATGTACGCGG GCACGGGCCT GAACGGGTAC GGCACGCTGA TCCTGGTCCA GCACAACGCG
GATTTTCTGA CCGCTTACGC GCACAACCGC AAGGTGCTCG TGAAGACGGG CGACGTCGTT
CAGCAGGGCG AACAGATCGC CGAGATGGGC ACCGGCGACA GCACACGCGC CGGAATGCTG
TTCGAGGTGC GGCGCGACGG CAAGCCCGTC AATCCGATGC CGTATCTGGC GAGCCGGCAG
CAGGGTTAG
 
Protein sequence
MTGVVSSMSK SEIDRSVAWL SGVAAAFVVA GCATTSPVTP TDTLAAAASS ASAAQPAAAP 
PGDAAQHPEH AAAPAPIATR YVVRRGDTLS AIAQANGCTV RELQAWNRMG RRTRIGIGQV
LRIAPPGAEN AVASEAADGA GATRAAGNAA GAARAADPAS GAGGALVADA PQPASAPESA
ADRAADHRVV QETKRHAQSI ALAWPAKGAV VETFQPGRNR GIRIVGRAGD PVRAAASGRV
MYAGTGLNGY GTLILVQHNA DFLTAYAHNR KVLVKTGDVV QQGEQIAEMG TGDSTRAGML
FEVRRDGKPV NPMPYLASRQ QG