Gene BMASAVP1_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_0216 
Symbol 
ID4678164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008784 
Strand
Start bp239337 
End bp240950 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content65% 
IMG OID639842744 
Producthypothetical protein 
Protein accessionYP_989827 
Protein GI121596509 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGATA CACAACAAGC CGACGTCGTC GTCGTAGGCT CGGGCGTCGC GGGCGCGATC 
GTTGCTCATC AGCTCGCGAT GGCCGGCAAA TCGGTGATCC TGCTCGAAGC CGGCCCGCGG
ATGCCGCGCT GGGAAATCGT CGAGCGGTTT CGCAACCAGC CGGACAAGAT GGATTTTATG
GCGCCGTACC CGTCGAGCCC GTGGGCGCCG CATCCCGAGT ACGGCCCGCC GAACGACTAT
CTGGTGCTCA AGGGCGAACA CAAGTTCAAC TCGCAGTACA TTCGCGCGGT GGGCGGCACG
ACGTGGCACT GGGCCGCCTC CGCGTGGCGC TTCATCCCGA ACGACTTCAA GATGAAGACC
GTGTACGGTG TCGGCCGCGA CTGGCCGATC CAGTATGACG ACATCGAGCA TGACTACCAG
CGGGCCGAGG AGGAACTGGG CGTGTGGGGG CCGGGCGCGG AAGAGGATCT GCTGTCGCCG
CGCAAGCAGC CTTACCCGAT GCCGCCGCTG CCGCTGTCCT ACAACGAGCG GACGATCAAG
ACCGCGCTCA ACAACCACGA TCCGAAGTAT CACGTCGTGA CCGAGCCCGT CGCGCGCAAC
AGCCGTCCGT ACGACGGCCG GCCGACCTGT TGCGGGAACA ACAACTGCAT GCCGATCTGC
CCGATCGGCG CGATGTACAA CGGCATCGTC CATGTCGAGA AGGCCGAGCA GGCGGGCGCG
AAGCTGATCG AGAACGCGGT CGTCCACAAG CTCGAGGTGG GGCCGCAGAA GAAGATCGTC
GCGGCGCGCT ATAAAGACCC GAAGGGCGTC GAGCATCGCG TCGAGGGCAA GTATTTCGTG
CTCGCCGCGA ACGGCATCGA AACGCCGAAG CTGATGCTGA TGTCGACGAG CCACGATTTC
CCGAACGGCG TGGGCAACAG CTCCGACATG GTCGGCCGCA ACCTGATGGA CCACCCGGGC
ACGGGCGTGT CGTTCTACGC GAGCGAGAAG CTGTGGCCGG GCCGCGGGCC GCAGGAGATG
ACCTCGCTGA TCGGTTTTCG CGACGGGGCG TTTCGCGCGA CCGAGGCGGC GAAGAAGATC
CATCTGTCGA ACCTGTCGCG CGTCGACCAG GAGACGCAGA AGATCTTCAA GACGGGCAAG
CTGCTGAAGC CCGCCGAGCT TGATGCGCAG ATTCGCGACC GCTCCGCGCG CTACGTGCAG
TTCGACTGCT TCCACGAGAT CCTGCCGCAG CCGGAGAACC GCATCGTGCC GAGCCGGACG
GCGACCGACG CGATCGGTAT CCCGCGCCCG GAAATCACGT ATGCGATCGA CGATTACGTG
AAGCGCGGCG CCGCGCACAC GCGCGAAGTG TATGCGACGG CCGCGCAGGT GCTGGGCGGC
ACCGACGTCG CGTTCAACGA CGAATTCGCG CCGAACAACC ACATCACCGG CTCGACGATC
ATGGGCGCGG ACCCGCGCGA TTCGGTCGTC GACAAGGATT GCCGCACGTT CGACCATCCG
AACCTGTTCG TCTCGAGCAG CGCGACGATG CCGACGGTCG GCACGGTGAA CGTGACGTTG
ACGATCGCGG CGCTCGCGCT GCGGATCTCG GACCAGTTGA AGAAGGAAAT CTGA
 
Protein sequence
MADTQQADVV VVGSGVAGAI VAHQLAMAGK SVILLEAGPR MPRWEIVERF RNQPDKMDFM 
APYPSSPWAP HPEYGPPNDY LVLKGEHKFN SQYIRAVGGT TWHWAASAWR FIPNDFKMKT
VYGVGRDWPI QYDDIEHDYQ RAEEELGVWG PGAEEDLLSP RKQPYPMPPL PLSYNERTIK
TALNNHDPKY HVVTEPVARN SRPYDGRPTC CGNNNCMPIC PIGAMYNGIV HVEKAEQAGA
KLIENAVVHK LEVGPQKKIV AARYKDPKGV EHRVEGKYFV LAANGIETPK LMLMSTSHDF
PNGVGNSSDM VGRNLMDHPG TGVSFYASEK LWPGRGPQEM TSLIGFRDGA FRATEAAKKI
HLSNLSRVDQ ETQKIFKTGK LLKPAELDAQ IRDRSARYVQ FDCFHEILPQ PENRIVPSRT
ATDAIGIPRP EITYAIDDYV KRGAAHTREV YATAAQVLGG TDVAFNDEFA PNNHITGSTI
MGADPRDSVV DKDCRTFDHP NLFVSSSATM PTVGTVNVTL TIAALALRIS DQLKKEI