Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0188 |
Symbol | |
ID | 4677266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | + |
Start bp | 217397 |
End bp | 218956 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639842716 |
Product | AraC family transcriptional regulator |
Protein accession | YP_989799 |
Protein GI | 121596636 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTGTG ATTTCTATTT CCCGTTGATC GCCACGCTCG CCTCCGCGCT CGCGCCGCCC GGGCTGCGCG CGAAAATCCG CGAGGCGAGA GTCCTCTCCG CGTCCGCCGA CCTCGCGCGT CTCACGCAGG ACGGTTGCGG CGACGCGGAG CGAGCGTACC GGATCCAGCT GCACGCCGAC ATGCAGCTCG CGATGGCGCT CGAATTCGAT GCCGAGGAAT CGTATAGAAG GTCACGCAAG CTGATGCATG CGCCGAAGGA CGAGATCCGT CTGCTGTCGT TTCGCAACAC CGGATGGCAG GCGCTGTTCC GGCGCCGGCT CGGCACCGCG ATGGCCTGCT TCGCGAACGT GACCAGCGAG CCCGCCGTCG ATCCCTGCCG CCGCATCGAG GGGCTGTTCG GGACGATGTG CGTGTGGTTC GAGCTCGGCC ATCTCGACGA GGCCGGCTAC CTGCTCGACG ACATCGAGCT CGCGATCGAG CGCCTGCTCG CCTCGCACGA GGATTTCGCG CTGTGGCGCG AGCTCGCGCA GACGATGCGC GCGGATCTGG ATCTGCAAAG ACTCGTGCGG CATGCACCGG AGCTCTCCGA TCACGTGTAC TGGCAATCGG CGCGCCTGAG CGATCCGGTC CGCCCGCCCG TCGAGCGCGA GCGGCTCGCG AGCCGCCCGA TCGCCGAACA GGACGTGCGC TCGCCGCTGC TGCGCGCGCG CCTCGATTTC AGGACCGCGC TGCGCCGCCT CGCCGGCGGG CAAGCCGACG CGCTCAACGA TCTGATGGCG CATCTCGACT GGGCCGACGC GAACGGCCTG ACGTCCTATC AGAACTCGGC CCGGCAGGAA ATCGCGCTCG CCGGCCTGAT CGGCAACGCG CCGCATGTCG CGGAGATGGT GCTCGCGCCG CTCGCGAACG AAATCCGCGT CGGGCACCAT CACGGTCATC TCGAGATCCT GTACTGCCTC GCGAAGGTGA ATCAGGCGCA GGGCCGAACC CACCATTCGC AACAGCTGTA CAGCCGCTAC GCGATGACGG CGGTCCATTG CGCGCGCAAG GGCGCGTGCG ATCTCGCGCG CAACAGCCCG CAGGGGCACG CGCCCCACGT CGCGGACGAC ATCAGCGCGC GCCTGCCCGC CAAATACCGC CGCGCGTACC ATTTCCTGCT GAGCAACCTC GAACGCAGCG ATCTGGCGAT CGGCGAGATC GCGGAAGTCA TCGGCGTGAC GGTTCGCTCG CTGCAGAACA CGTTCAAGGC GAGCCTGGGC GCGACGCCGT CGGAGATCAT CCGTCAGGAA CGGATGAAGC GCATCCATCG TGAACTGCAG GGCGAGGATG CGCGGTTCGG CCAGCGCGTG CTCGACTCCG GCAACCGCTG GGGCGTGCCG AATCGCTCGA CGCTGCTCAA CGCGTACAAG CGGCAGTTCA ACGAGGCGCC TTCGCAGACG CTGCACCGCA AGCATCCGTA CAAGCCCGGC GAAGACGTCG CGTCCGGCGT CCTCGCGAGC GCCGCGCATC CGGCGGCGGC CAGGCAGCAG CACGAAGCGA GCGTGTCGAC GGCCGACTGA
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Protein sequence | MFCDFYFPLI ATLASALAPP GLRAKIREAR VLSASADLAR LTQDGCGDAE RAYRIQLHAD MQLAMALEFD AEESYRRSRK LMHAPKDEIR LLSFRNTGWQ ALFRRRLGTA MACFANVTSE PAVDPCRRIE GLFGTMCVWF ELGHLDEAGY LLDDIELAIE RLLASHEDFA LWRELAQTMR ADLDLQRLVR HAPELSDHVY WQSARLSDPV RPPVERERLA SRPIAEQDVR SPLLRARLDF RTALRRLAGG QADALNDLMA HLDWADANGL TSYQNSARQE IALAGLIGNA PHVAEMVLAP LANEIRVGHH HGHLEILYCL AKVNQAQGRT HHSQQLYSRY AMTAVHCARK GACDLARNSP QGHAPHVADD ISARLPAKYR RAYHFLLSNL ERSDLAIGEI AEVIGVTVRS LQNTFKASLG ATPSEIIRQE RMKRIHRELQ GEDARFGQRV LDSGNRWGVP NRSTLLNAYK RQFNEAPSQT LHRKHPYKPG EDVASGVLAS AAHPAAARQQ HEASVSTAD
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